Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-2P42586 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Nkx2-2P42586 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-2P42586 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.94■□□□□ 0.94
Nkx2-2P42586 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-2P42586 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Nkx2-2P42586 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-2P42586 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.93■□□□□ 0.94
Nkx2-2P42586 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-2P42586 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-2P42586 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-2P42586 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Nkx2-2P42586 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Nkx2-2P42586 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-2P42586 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-2P42586 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-2P42586 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.9■□□□□ 0.94
Nkx2-2P42586 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-2P42586 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-2P42586 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-2P42586 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-2P42586 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-2P42586 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-2P42586 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-2P42586 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-2P42586 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-2P42586 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.89■□□□□ 0.93
Nkx2-2P42586 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-2P42586 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-2P42586 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-2P42586 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Nkx2-2P42586 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-2P42586 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-2P42586 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-2P42586 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-2P42586 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-2P42586 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-2P42586 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-2P42586 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-2P42586 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-2P42586 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-2P42586 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Nkx2-2P42586 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-2P42586 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.86■□□□□ 0.93
Nkx2-2P42586 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.86■□□□□ 0.93
Nkx2-2P42586 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-2P42586 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-2P42586 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-2P42586 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Nkx2-2P42586 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.84■□□□□ 0.93
Nkx2-2P42586 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx2-2P42586 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx2-2P42586 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nkx2-2P42586 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.84■□□□□ 0.93
Nkx2-2P42586 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.84■□□□□ 0.93
Nkx2-2P42586 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.84■□□□□ 0.93
Nkx2-2P42586 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.84■□□□□ 0.93
Nkx2-2P42586 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx2-2P42586 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.83■□□□□ 0.93
Nkx2-2P42586 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.83■□□□□ 0.92
Nkx2-2P42586 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-2P42586 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-2P42586 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-2P42586 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-2P42586 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Nkx2-2P42586 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-2P42586 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.81■□□□□ 0.92
Nkx2-2P42586 Gm6311-201ENSMUST00000073790 878 ntBASIC20.81■□□□□ 0.92
Nkx2-2P42586 Terc-201ENSMUST00000082862 423 ntBASIC20.81■□□□□ 0.92
Nkx2-2P42586 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-2P42586 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-2P42586 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-2P42586 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nkx2-2P42586 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-2P42586 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-2P42586 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nkx2-2P42586 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-2P42586 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-2P42586 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-2P42586 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-2P42586 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-2P42586 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-2P42586 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.79■□□□□ 0.92
Nkx2-2P42586 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Nkx2-2P42586 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-2P42586 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.78■□□□□ 0.92
Nkx2-2P42586 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-2P42586 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.78■□□□□ 0.92
Nkx2-2P42586 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-2P42586 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-2P42586 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-2P42586 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-2P42586 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-2P42586 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-2P42586 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.76■□□□□ 0.91
Nkx2-2P42586 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-2P42586 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.76■□□□□ 0.91
Nkx2-2P42586 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-2P42586 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-2P42586 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms