Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Slc6a11P31650 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.47■■□□□ 1.03
Slc6a11P31650 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a11P31650 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a11P31650 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a11P31650 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a11P31650 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Slc6a11P31650 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a11P31650 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a11P31650 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.45■■□□□ 1.02
Slc6a11P31650 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Slc6a11P31650 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a11P31650 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc6a11P31650 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc6a11P31650 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.44■■□□□ 1.02
Slc6a11P31650 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc6a11P31650 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc6a11P31650 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a11P31650 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Slc6a11P31650 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a11P31650 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a11P31650 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Slc6a11P31650 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.43■■□□□ 1.02
Slc6a11P31650 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a11P31650 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.43■■□□□ 1.02
Slc6a11P31650 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a11P31650 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc6a11P31650 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Slc6a11P31650 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc6a11P31650 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
Slc6a11P31650 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Slc6a11P31650 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Slc6a11P31650 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Slc6a11P31650 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc6a11P31650 Gm11175-201ENSMUST00000116172 543 ntBASIC21.4■■□□□ 1.02
Slc6a11P31650 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Slc6a11P31650 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Slc6a11P31650 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc6a11P31650 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc6a11P31650 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
Slc6a11P31650 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.38■■□□□ 1.01
Slc6a11P31650 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a11P31650 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a11P31650 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a11P31650 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Slc6a11P31650 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a11P31650 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a11P31650 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a11P31650 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a11P31650 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a11P31650 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.36■■□□□ 1.01
Slc6a11P31650 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a11P31650 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a11P31650 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a11P31650 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Slc6a11P31650 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Slc6a11P31650 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a11P31650 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.34■■□□□ 1.01
Slc6a11P31650 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a11P31650 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a11P31650 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a11P31650 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a11P31650 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.34■■□□□ 1.01
Slc6a11P31650 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a11P31650 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a11P31650 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a11P31650 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a11P31650 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a11P31650 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Slc6a11P31650 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a11P31650 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc6a11P31650 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc6a11P31650 Cap2-205ENSMUST00000225824 1634 ntBASIC21.33■■□□□ 1
Slc6a11P31650 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Slc6a11P31650 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a11P31650 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.32■■□□□ 1
Slc6a11P31650 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.32■■□□□ 1
Slc6a11P31650 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.32■■□□□ 1
Slc6a11P31650 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a11P31650 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a11P31650 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc6a11P31650 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Slc6a11P31650 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc6a11P31650 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc6a11P31650 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.31■■□□□ 1
Slc6a11P31650 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Slc6a11P31650 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a11P31650 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a11P31650 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a11P31650 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slc6a11P31650 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a11P31650 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a11P31650 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.29■■□□□ 1
Slc6a11P31650 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a11P31650 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc6a11P31650 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a11P31650 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a11P31650 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a11P31650 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a11P31650 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms