Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
H3f3cP02301 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.37■□□□□ 0.69
H3f3cP02301 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H3f3cP02301 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
H3f3cP02301 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.36■□□□□ 0.69
H3f3cP02301 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H3f3cP02301 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.36■□□□□ 0.69
H3f3cP02301 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.36■□□□□ 0.69
H3f3cP02301 Gm9812-201ENSMUST00000061934 968 ntBASIC19.36■□□□□ 0.69
H3f3cP02301 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H3f3cP02301 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
H3f3cP02301 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3f3cP02301 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3f3cP02301 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
H3f3cP02301 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3f3cP02301 Gm45364-201ENSMUST00000210883 159 ntBASIC19.35■□□□□ 0.69
H3f3cP02301 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3f3cP02301 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
H3f3cP02301 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H3f3cP02301 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
H3f3cP02301 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
H3f3cP02301 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H3f3cP02301 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.34■□□□□ 0.69
H3f3cP02301 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
H3f3cP02301 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
H3f3cP02301 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.33■□□□□ 0.68
H3f3cP02301 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H3f3cP02301 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
H3f3cP02301 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
H3f3cP02301 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H3f3cP02301 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
H3f3cP02301 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
H3f3cP02301 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
H3f3cP02301 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H3f3cP02301 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.3■□□□□ 0.68
H3f3cP02301 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
H3f3cP02301 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.29■□□□□ 0.68
H3f3cP02301 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.29■□□□□ 0.68
H3f3cP02301 Gm6311-201ENSMUST00000073790 878 ntBASIC19.29■□□□□ 0.68
H3f3cP02301 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
H3f3cP02301 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
H3f3cP02301 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3cP02301 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3cP02301 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3cP02301 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3cP02301 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3cP02301 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
H3f3cP02301 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
H3f3cP02301 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.27■□□□□ 0.68
H3f3cP02301 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.27■□□□□ 0.68
H3f3cP02301 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.27■□□□□ 0.68
H3f3cP02301 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.27■□□□□ 0.67
H3f3cP02301 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
H3f3cP02301 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3cP02301 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3cP02301 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3cP02301 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3f3cP02301 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3f3cP02301 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3f3cP02301 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.25■□□□□ 0.67
H3f3cP02301 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
H3f3cP02301 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.25■□□□□ 0.67
H3f3cP02301 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
H3f3cP02301 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H3f3cP02301 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H3f3cP02301 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3f3cP02301 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3f3cP02301 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H3f3cP02301 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3f3cP02301 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H3f3cP02301 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3f3cP02301 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3f3cP02301 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H3f3cP02301 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
H3f3cP02301 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H3f3cP02301 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
H3f3cP02301 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3f3cP02301 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H3f3cP02301 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H3f3cP02301 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3f3cP02301 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3f3cP02301 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3f3cP02301 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3f3cP02301 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3f3cP02301 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3f3cP02301 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
H3f3cP02301 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3f3cP02301 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
H3f3cP02301 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
H3f3cP02301 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H3f3cP02301 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
H3f3cP02301 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
H3f3cP02301 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
H3f3cP02301 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
H3f3cP02301 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
H3f3cP02301 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H3f3cP02301 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H3f3cP02301 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
H3f3cP02301 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H3f3cP02301 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms