Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IghmP01872 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IghmP01872 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IghmP01872 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IghmP01872 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.38■■□□□ 1.01
IghmP01872 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IghmP01872 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IghmP01872 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IghmP01872 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IghmP01872 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
IghmP01872 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IghmP01872 Gm8503-201ENSMUST00000118131 455 ntBASIC21.36■■□□□ 1.01
IghmP01872 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.36■■□□□ 1.01
IghmP01872 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
IghmP01872 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IghmP01872 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IghmP01872 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
IghmP01872 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
IghmP01872 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
IghmP01872 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IghmP01872 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
IghmP01872 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
IghmP01872 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IghmP01872 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
IghmP01872 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
IghmP01872 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
IghmP01872 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
IghmP01872 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.32■■□□□ 1
IghmP01872 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.32■■□□□ 1
IghmP01872 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.32■■□□□ 1
IghmP01872 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
IghmP01872 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IghmP01872 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
IghmP01872 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IghmP01872 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
IghmP01872 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.31■■□□□ 1
IghmP01872 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IghmP01872 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IghmP01872 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IghmP01872 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.3■■□□□ 1
IghmP01872 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
IghmP01872 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.3■■□□□ 1
IghmP01872 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.3■■□□□ 1
IghmP01872 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IghmP01872 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IghmP01872 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
IghmP01872 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.3■■□□□ 1
IghmP01872 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
IghmP01872 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
IghmP01872 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
IghmP01872 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
IghmP01872 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
IghmP01872 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.29■■□□□ 1
IghmP01872 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.28■■□□□ 1
IghmP01872 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IghmP01872 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.28■■□□□ 1
IghmP01872 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.28■■□□□ 1
IghmP01872 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
IghmP01872 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
IghmP01872 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IghmP01872 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
IghmP01872 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.27■■□□□ 1
IghmP01872 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
IghmP01872 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
IghmP01872 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
IghmP01872 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IghmP01872 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IghmP01872 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IghmP01872 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
IghmP01872 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IghmP01872 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IghmP01872 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
IghmP01872 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.25■□□□□ 0.99
IghmP01872 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
IghmP01872 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IghmP01872 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
IghmP01872 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.24■□□□□ 0.99
IghmP01872 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
IghmP01872 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
IghmP01872 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
IghmP01872 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IghmP01872 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
IghmP01872 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
IghmP01872 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IghmP01872 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
IghmP01872 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IghmP01872 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
IghmP01872 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IghmP01872 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IghmP01872 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
IghmP01872 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IghmP01872 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IghmP01872 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.19■□□□□ 0.98
IghmP01872 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.18■□□□□ 0.98
IghmP01872 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IghmP01872 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IghmP01872 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.18■□□□□ 0.98
IghmP01872 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IghmP01872 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IghmP01872 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms