Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01643 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P01643 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
P01643 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.18■□□□□ 0.5
P01643 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P01643 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
P01643 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.17■□□□□ 0.5
P01643 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.17■□□□□ 0.5
P01643 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P01643 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01643 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
P01643 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01643 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01643 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.15■□□□□ 0.5
P01643 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P01643 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.15■□□□□ 0.5
P01643 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01643 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01643 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P01643 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P01643 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
P01643 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
P01643 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.14■□□□□ 0.49
P01643 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
P01643 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01643 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
P01643 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01643 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01643 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
P01643 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01643 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
P01643 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
P01643 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01643 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
P01643 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
P01643 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P01643 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P01643 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P01643 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P01643 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.1■□□□□ 0.49
P01643 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
P01643 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01643 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01643 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01643 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01643 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01643 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P01643 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
P01643 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01643 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.08■□□□□ 0.49
P01643 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
P01643 Gm44428-201ENSMUST00000204474 874 ntBASIC18.08■□□□□ 0.48
P01643 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P01643 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.08■□□□□ 0.48
P01643 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
P01643 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01643 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01643 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01643 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P01643 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.07■□□□□ 0.48
P01643 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
P01643 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01643 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.07■□□□□ 0.48
P01643 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01643 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01643 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01643 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
P01643 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P01643 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.06■□□□□ 0.48
P01643 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01643 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01643 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01643 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01643 Gm10420-201ENSMUST00000121713 882 ntBASIC18.05■□□□□ 0.48
P01643 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01643 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01643 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01643 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.04■□□□□ 0.48
P01643 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
P01643 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
P01643 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
P01643 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.03■□□□□ 0.48
P01643 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
P01643 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
P01643 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
P01643 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.02■□□□□ 0.48
P01643 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.02■□□□□ 0.48
P01643 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.02■□□□□ 0.48
P01643 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
P01643 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
P01643 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01643 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.01■□□□□ 0.47
P01643 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
P01643 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
P01643 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
P01643 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01643 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
P01643 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P01643 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
P01643 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms