Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gfi1bO70237 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gfi1bO70237 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gfi1bO70237 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Gfi1bO70237 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gfi1bO70237 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gfi1bO70237 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gfi1bO70237 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gfi1bO70237 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gfi1bO70237 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gfi1bO70237 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Gfi1bO70237 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gfi1bO70237 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gfi1bO70237 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gfi1bO70237 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gfi1bO70237 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gfi1bO70237 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Gfi1bO70237 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Gfi1bO70237 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gfi1bO70237 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gfi1bO70237 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gfi1bO70237 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gfi1bO70237 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gfi1bO70237 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gfi1bO70237 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gfi1bO70237 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gfi1bO70237 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gfi1bO70237 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gfi1bO70237 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.81■□□□□ 0.6
Gfi1bO70237 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfi1bO70237 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfi1bO70237 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfi1bO70237 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfi1bO70237 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfi1bO70237 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gfi1bO70237 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfi1bO70237 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfi1bO70237 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.79■□□□□ 0.6
Gfi1bO70237 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfi1bO70237 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gfi1bO70237 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfi1bO70237 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfi1bO70237 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Gfi1bO70237 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gfi1bO70237 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfi1bO70237 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfi1bO70237 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.78■□□□□ 0.6
Gfi1bO70237 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfi1bO70237 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfi1bO70237 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gfi1bO70237 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gfi1bO70237 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Gfi1bO70237 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gfi1bO70237 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gfi1bO70237 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Gfi1bO70237 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Gfi1bO70237 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.77■□□□□ 0.59
Gfi1bO70237 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Gfi1bO70237 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gfi1bO70237 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.76■□□□□ 0.59
Gfi1bO70237 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.76■□□□□ 0.59
Gfi1bO70237 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gfi1bO70237 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.75■□□□□ 0.59
Gfi1bO70237 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.75■□□□□ 0.59
Gfi1bO70237 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gfi1bO70237 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gfi1bO70237 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gfi1bO70237 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.75■□□□□ 0.59
Gfi1bO70237 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gfi1bO70237 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gfi1bO70237 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gfi1bO70237 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gfi1bO70237 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gfi1bO70237 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gfi1bO70237 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Gfi1bO70237 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gfi1bO70237 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gfi1bO70237 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Gfi1bO70237 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Gfi1bO70237 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gfi1bO70237 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gfi1bO70237 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gfi1bO70237 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gfi1bO70237 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gfi1bO70237 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gfi1bO70237 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gfi1bO70237 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gfi1bO70237 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Gfi1bO70237 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.71■□□□□ 0.59
Gfi1bO70237 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gfi1bO70237 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gfi1bO70237 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gfi1bO70237 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gfi1bO70237 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gfi1bO70237 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gfi1bO70237 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.69■□□□□ 0.58
Gfi1bO70237 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gfi1bO70237 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.69■□□□□ 0.58
Gfi1bO70237 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gfi1bO70237 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms