Protein–RNA interactions for Protein: O35228

Ebi3, Interleukin-27 subunit beta, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebi3O35228 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebi3O35228 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebi3O35228 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.45■□□□□ 0.38
Ebi3O35228 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.45■□□□□ 0.38
Ebi3O35228 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.45■□□□□ 0.38
Ebi3O35228 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebi3O35228 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ebi3O35228 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebi3O35228 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.44■□□□□ 0.38
Ebi3O35228 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebi3O35228 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebi3O35228 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
Ebi3O35228 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ebi3O35228 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebi3O35228 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ebi3O35228 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebi3O35228 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ebi3O35228 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ebi3O35228 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ebi3O35228 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebi3O35228 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebi3O35228 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ebi3O35228 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.42■□□□□ 0.38
Ebi3O35228 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ebi3O35228 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebi3O35228 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebi3O35228 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ebi3O35228 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebi3O35228 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ebi3O35228 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ebi3O35228 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ebi3O35228 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ebi3O35228 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ebi3O35228 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ebi3O35228 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ebi3O35228 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ebi3O35228 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ebi3O35228 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ebi3O35228 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Ebi3O35228 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebi3O35228 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebi3O35228 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebi3O35228 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ebi3O35228 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebi3O35228 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ebi3O35228 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.37■□□□□ 0.37
Ebi3O35228 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebi3O35228 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebi3O35228 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ebi3O35228 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebi3O35228 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ebi3O35228 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebi3O35228 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ebi3O35228 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebi3O35228 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebi3O35228 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ebi3O35228 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ebi3O35228 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.35■□□□□ 0.37
Ebi3O35228 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ebi3O35228 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebi3O35228 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ebi3O35228 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebi3O35228 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebi3O35228 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebi3O35228 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebi3O35228 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ebi3O35228 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ebi3O35228 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.33■□□□□ 0.36
Ebi3O35228 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.33■□□□□ 0.36
Ebi3O35228 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ebi3O35228 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebi3O35228 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebi3O35228 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebi3O35228 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Ebi3O35228 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebi3O35228 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ebi3O35228 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ebi3O35228 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ebi3O35228 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.31■□□□□ 0.36
Ebi3O35228 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.31■□□□□ 0.36
Ebi3O35228 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebi3O35228 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ebi3O35228 Gm4799-201ENSMUST00000095396 657 ntBASIC17.3■□□□□ 0.36
Ebi3O35228 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebi3O35228 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Ebi3O35228 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebi3O35228 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ebi3O35228 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebi3O35228 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebi3O35228 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.28■□□□□ 0.36
Ebi3O35228 Gm9812-201ENSMUST00000061934 968 ntBASIC17.28■□□□□ 0.36
Ebi3O35228 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebi3O35228 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ebi3O35228 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebi3O35228 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebi3O35228 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ebi3O35228 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ebi3O35228 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ebi3O35228 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.27■□□□□ 0.36
Ebi3O35228 Gm7432-201ENSMUST00000210343 879 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms