Protein–RNA interactions for Protein: O08859

Tnfaip6, Tumor necrosis factor-inducible gene 6 protein, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip6O08859 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Tnfaip6O08859 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfaip6O08859 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tnfaip6O08859 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Tnfaip6O08859 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfaip6O08859 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfaip6O08859 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.68■□□□□ 0.58
Tnfaip6O08859 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfaip6O08859 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.68■□□□□ 0.58
Tnfaip6O08859 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfaip6O08859 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfaip6O08859 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.67■□□□□ 0.58
Tnfaip6O08859 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Tnfaip6O08859 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfaip6O08859 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfaip6O08859 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfaip6O08859 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfaip6O08859 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tnfaip6O08859 Mir3960-201ENSMUST00000198213 73 ntBASIC18.66■□□□□ 0.58
Tnfaip6O08859 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfaip6O08859 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.65■□□□□ 0.58
Tnfaip6O08859 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfaip6O08859 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Tnfaip6O08859 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfaip6O08859 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfaip6O08859 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfaip6O08859 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tnfaip6O08859 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.64■□□□□ 0.58
Tnfaip6O08859 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfaip6O08859 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfaip6O08859 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfaip6O08859 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfaip6O08859 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.63■□□□□ 0.57
Tnfaip6O08859 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.63■□□□□ 0.57
Tnfaip6O08859 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfaip6O08859 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Tnfaip6O08859 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfaip6O08859 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Tnfaip6O08859 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfaip6O08859 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfaip6O08859 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfaip6O08859 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.6■□□□□ 0.57
Tnfaip6O08859 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfaip6O08859 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfaip6O08859 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfaip6O08859 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfaip6O08859 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.58■□□□□ 0.57
Tnfaip6O08859 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfaip6O08859 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfaip6O08859 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.57■□□□□ 0.56
Tnfaip6O08859 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfaip6O08859 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfaip6O08859 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.57■□□□□ 0.56
Tnfaip6O08859 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip6O08859 Gm45364-201ENSMUST00000210883 159 ntBASIC18.56■□□□□ 0.56
Tnfaip6O08859 Gm9812-201ENSMUST00000061934 968 ntBASIC18.56■□□□□ 0.56
Tnfaip6O08859 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Tnfaip6O08859 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip6O08859 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip6O08859 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfaip6O08859 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfaip6O08859 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tnfaip6O08859 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Tnfaip6O08859 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfaip6O08859 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfaip6O08859 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfaip6O08859 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfaip6O08859 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfaip6O08859 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.54■□□□□ 0.56
Tnfaip6O08859 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.54■□□□□ 0.56
Tnfaip6O08859 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tnfaip6O08859 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfaip6O08859 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tnfaip6O08859 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfaip6O08859 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfaip6O08859 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.53■□□□□ 0.56
Tnfaip6O08859 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.53■□□□□ 0.56
Tnfaip6O08859 Gm6311-201ENSMUST00000073790 878 ntBASIC18.53■□□□□ 0.56
Tnfaip6O08859 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfaip6O08859 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.53■□□□□ 0.56
Tnfaip6O08859 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfaip6O08859 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfaip6O08859 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfaip6O08859 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Tnfaip6O08859 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tnfaip6O08859 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfaip6O08859 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfaip6O08859 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfaip6O08859 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.51■□□□□ 0.55
Tnfaip6O08859 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip6O08859 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.51■□□□□ 0.55
Tnfaip6O08859 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip6O08859 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.5■□□□□ 0.55
Tnfaip6O08859 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip6O08859 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip6O08859 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip6O08859 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.49■□□□□ 0.55
Tnfaip6O08859 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip6O08859 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip6O08859 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms