Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Gm4340L7N2C4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.64■■■□□ 2.01
Gm4340L7N2C4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Gm4340L7N2C4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.63■■■□□ 2.01
Gm4340L7N2C4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Gm4340L7N2C4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Gm4340L7N2C4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
Gm4340L7N2C4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Gm4340L7N2C4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Gm4340L7N2C4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
Gm4340L7N2C4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Gm4340L7N2C4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Gm4340L7N2C4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
Gm4340L7N2C4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Gm4340L7N2C4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Gm4340L7N2C4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Gm4340L7N2C4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Gm4340L7N2C4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Gm4340L7N2C4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.57■■■□□ 2
Gm4340L7N2C4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.57■■■□□ 2
Gm4340L7N2C4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Gm4340L7N2C4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.57■■■□□ 2
Gm4340L7N2C4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC27.57■■■□□ 2
Gm4340L7N2C4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Gm4340L7N2C4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.56■■■□□ 2
Gm4340L7N2C4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Gm4340L7N2C4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Gm4340L7N2C4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.56■■■□□ 2
Gm4340L7N2C4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Gm4340L7N2C4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.55■■■□□ 2
Gm4340L7N2C4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.54■■■□□ 2
Gm4340L7N2C4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Gm4340L7N2C4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Gm4340L7N2C4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.53■■■□□ 2
Gm4340L7N2C4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
Gm4340L7N2C4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Gm4340L7N2C4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.52■■■□□ 2
Gm4340L7N2C4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Gm4340L7N2C4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Gm4340L7N2C4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
Gm4340L7N2C4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.51■■■□□ 2
Gm4340L7N2C4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Gm4340L7N2C4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Gm4340L7N2C4 Gm44428-201ENSMUST00000204474 874 ntBASIC27.51■■□□□ 1.99
Gm4340L7N2C4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Gm4340L7N2C4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.5■■□□□ 1.99
Gm4340L7N2C4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Gm4340L7N2C4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.5■■□□□ 1.99
Gm4340L7N2C4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Gm4340L7N2C4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Gm4340L7N2C4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Gm4340L7N2C4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.48■■□□□ 1.99
Gm4340L7N2C4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Gm4340L7N2C4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Gm4340L7N2C4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Gm4340L7N2C4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Gm4340L7N2C4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.47■■□□□ 1.99
Gm4340L7N2C4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Gm4340L7N2C4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Gm4340L7N2C4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.46■■□□□ 1.99
Gm4340L7N2C4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Gm4340L7N2C4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Gm4340L7N2C4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Gm4340L7N2C4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Gm4340L7N2C4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Gm4340L7N2C4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Gm4340L7N2C4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Gm4340L7N2C4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
Gm4340L7N2C4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Gm4340L7N2C4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.44■■□□□ 1.98
Gm4340L7N2C4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Gm4340L7N2C4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Gm4340L7N2C4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.43■■□□□ 1.98
Gm4340L7N2C4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Gm4340L7N2C4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.43■■□□□ 1.98
Gm4340L7N2C4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Gm4340L7N2C4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Gm4340L7N2C4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Gm4340L7N2C4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.41■■□□□ 1.98
Gm4340L7N2C4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC27.41■■□□□ 1.98
Gm4340L7N2C4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Gm4340L7N2C4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Gm4340L7N2C4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Gm4340L7N2C4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Gm4340L7N2C4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Gm4340L7N2C4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Gm4340L7N2C4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Gm4340L7N2C4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Gm4340L7N2C4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Gm4340L7N2C4 Gm10420-201ENSMUST00000121713 882 ntBASIC27.38■■□□□ 1.97
Gm4340L7N2C4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
Gm4340L7N2C4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Gm4340L7N2C4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Gm4340L7N2C4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Gm4340L7N2C4 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.37■■□□□ 1.97
Gm4340L7N2C4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Gm4340L7N2C4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
Gm4340L7N2C4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
Gm4340L7N2C4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
Gm4340L7N2C4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms