Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Atf6F6VAN0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Atf6F6VAN0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Atf6F6VAN0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Atf6F6VAN0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Atf6F6VAN0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Atf6F6VAN0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
Atf6F6VAN0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Atf6F6VAN0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Atf6F6VAN0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Atf6F6VAN0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Atf6F6VAN0 Gm4799-201ENSMUST00000095396 657 ntBASIC23.28■■□□□ 1.32
Atf6F6VAN0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Atf6F6VAN0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Atf6F6VAN0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Atf6F6VAN0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Atf6F6VAN0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Atf6F6VAN0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Atf6F6VAN0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Atf6F6VAN0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Atf6F6VAN0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.26■■□□□ 1.31
Atf6F6VAN0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Atf6F6VAN0 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.25■■□□□ 1.31
Atf6F6VAN0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Atf6F6VAN0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Atf6F6VAN0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.25■■□□□ 1.31
Atf6F6VAN0 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.25■■□□□ 1.31
Atf6F6VAN0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Atf6F6VAN0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Atf6F6VAN0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Atf6F6VAN0 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.24■■□□□ 1.31
Atf6F6VAN0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Atf6F6VAN0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.23■■□□□ 1.31
Atf6F6VAN0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Atf6F6VAN0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Atf6F6VAN0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Atf6F6VAN0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.22■■□□□ 1.31
Atf6F6VAN0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
Atf6F6VAN0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Atf6F6VAN0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Atf6F6VAN0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Atf6F6VAN0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Atf6F6VAN0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Atf6F6VAN0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Atf6F6VAN0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Atf6F6VAN0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Atf6F6VAN0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Atf6F6VAN0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Atf6F6VAN0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Atf6F6VAN0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Atf6F6VAN0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Atf6F6VAN0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Atf6F6VAN0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Atf6F6VAN0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.17■■□□□ 1.3
Atf6F6VAN0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Atf6F6VAN0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Atf6F6VAN0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Atf6F6VAN0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
Atf6F6VAN0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Atf6F6VAN0 Mir3960-201ENSMUST00000198213 73 ntBASIC23.16■■□□□ 1.3
Atf6F6VAN0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Atf6F6VAN0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Atf6F6VAN0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atf6F6VAN0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atf6F6VAN0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atf6F6VAN0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atf6F6VAN0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atf6F6VAN0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Atf6F6VAN0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Atf6F6VAN0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Atf6F6VAN0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Atf6F6VAN0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atf6F6VAN0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atf6F6VAN0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atf6F6VAN0 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.13■■□□□ 1.29
Atf6F6VAN0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Atf6F6VAN0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Atf6F6VAN0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.12■■□□□ 1.29
Atf6F6VAN0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.12■■□□□ 1.29
Atf6F6VAN0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Atf6F6VAN0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.12■■□□□ 1.29
Atf6F6VAN0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Atf6F6VAN0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Atf6F6VAN0 Gm45364-201ENSMUST00000210883 159 ntBASIC23.11■■□□□ 1.29
Atf6F6VAN0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.11■■□□□ 1.29
Atf6F6VAN0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Atf6F6VAN0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Atf6F6VAN0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Atf6F6VAN0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.1■■□□□ 1.29
Atf6F6VAN0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Atf6F6VAN0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Atf6F6VAN0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.08■■□□□ 1.29
Atf6F6VAN0 Gm9812-201ENSMUST00000061934 968 ntBASIC23.08■■□□□ 1.29
Atf6F6VAN0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Atf6F6VAN0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.08■■□□□ 1.28
Atf6F6VAN0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Atf6F6VAN0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.07■■□□□ 1.28
Atf6F6VAN0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Atf6F6VAN0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.07■■□□□ 1.28
Atf6F6VAN0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms