Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.25■□□□□ 0.67
Chd6A3KFM7 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.25■□□□□ 0.67
Chd6A3KFM7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd6A3KFM7 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.25■□□□□ 0.67
Chd6A3KFM7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd6A3KFM7 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.25■□□□□ 0.67
Chd6A3KFM7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.24■□□□□ 0.67
Chd6A3KFM7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Chd6A3KFM7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd6A3KFM7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.24■□□□□ 0.67
Chd6A3KFM7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.24■□□□□ 0.67
Chd6A3KFM7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd6A3KFM7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd6A3KFM7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd6A3KFM7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd6A3KFM7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd6A3KFM7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.22■□□□□ 0.67
Chd6A3KFM7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd6A3KFM7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd6A3KFM7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.21■□□□□ 0.67
Chd6A3KFM7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.21■□□□□ 0.67
Chd6A3KFM7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Chd6A3KFM7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.2■□□□□ 0.66
Chd6A3KFM7 Gm9812-201ENSMUST00000061934 968 ntBASIC19.2■□□□□ 0.66
Chd6A3KFM7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd6A3KFM7 Gm37136-201ENSMUST00000194368 194 ntBASIC19.2■□□□□ 0.66
Chd6A3KFM7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd6A3KFM7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd6A3KFM7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Chd6A3KFM7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Chd6A3KFM7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd6A3KFM7 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.19■□□□□ 0.66
Chd6A3KFM7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd6A3KFM7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd6A3KFM7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd6A3KFM7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd6A3KFM7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.18■□□□□ 0.66
Chd6A3KFM7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd6A3KFM7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Chd6A3KFM7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.17■□□□□ 0.66
Chd6A3KFM7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.17■□□□□ 0.66
Chd6A3KFM7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd6A3KFM7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd6A3KFM7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chd6A3KFM7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd6A3KFM7 Gm10232-201ENSMUST00000089221 720 ntBASIC19.16■□□□□ 0.66
Chd6A3KFM7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd6A3KFM7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.16■□□□□ 0.66
Chd6A3KFM7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.15■□□□□ 0.66
Chd6A3KFM7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.15■□□□□ 0.66
Chd6A3KFM7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd6A3KFM7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.15■□□□□ 0.66
Chd6A3KFM7 Gm9847-201ENSMUST00000052528 599 ntBASIC19.15■□□□□ 0.66
Chd6A3KFM7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chd6A3KFM7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd6A3KFM7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chd6A3KFM7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chd6A3KFM7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd6A3KFM7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd6A3KFM7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd6A3KFM7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chd6A3KFM7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.12■□□□□ 0.65
Chd6A3KFM7 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.12■□□□□ 0.65
Chd6A3KFM7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Chd6A3KFM7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd6A3KFM7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd6A3KFM7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd6A3KFM7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.11■□□□□ 0.65
Chd6A3KFM7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chd6A3KFM7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd6A3KFM7 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.09■□□□□ 0.65
Chd6A3KFM7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Chd6A3KFM7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd6A3KFM7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.09■□□□□ 0.65
Chd6A3KFM7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd6A3KFM7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Chd6A3KFM7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chd6A3KFM7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Chd6A3KFM7 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.08■□□□□ 0.64
Chd6A3KFM7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Chd6A3KFM7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.07■□□□□ 0.64
Chd6A3KFM7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Chd6A3KFM7 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.07■□□□□ 0.64
Chd6A3KFM7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd6A3KFM7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd6A3KFM7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd6A3KFM7 Gm18284-201ENSMUST00000172604 624 ntBASIC19.06■□□□□ 0.64
Chd6A3KFM7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
Chd6A3KFM7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd6A3KFM7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Chd6A3KFM7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Chd6A3KFM7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd6A3KFM7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.04■□□□□ 0.64
Chd6A3KFM7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd6A3KFM7 Gm27454-201ENSMUST00000185090 204 ntBASIC19.03■□□□□ 0.64
Chd6A3KFM7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Chd6A3KFM7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd6A3KFM7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd6A3KFM7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.02■□□□□ 0.64
Chd6A3KFM7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms