Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubr4A2AN08 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubr4A2AN08 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubr4A2AN08 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ubr4A2AN08 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
Ubr4A2AN08 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubr4A2AN08 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Gm9812-201ENSMUST00000061934 968 ntBASIC12.65□□□□□ -0.38
Ubr4A2AN08 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.65□□□□□ -0.38
Ubr4A2AN08 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubr4A2AN08 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubr4A2AN08 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC12.64□□□□□ -0.39
Ubr4A2AN08 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubr4A2AN08 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12.64□□□□□ -0.39
Ubr4A2AN08 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubr4A2AN08 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubr4A2AN08 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubr4A2AN08 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubr4A2AN08 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.63□□□□□ -0.39
Ubr4A2AN08 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubr4A2AN08 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubr4A2AN08 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubr4A2AN08 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ubr4A2AN08 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.63□□□□□ -0.39
Ubr4A2AN08 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ubr4A2AN08 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubr4A2AN08 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC12.62□□□□□ -0.39
Ubr4A2AN08 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC12.62□□□□□ -0.39
Ubr4A2AN08 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubr4A2AN08 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.61□□□□□ -0.39
Ubr4A2AN08 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubr4A2AN08 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubr4A2AN08 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.61□□□□□ -0.39
Ubr4A2AN08 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubr4A2AN08 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubr4A2AN08 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubr4A2AN08 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubr4A2AN08 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.6□□□□□ -0.39
Ubr4A2AN08 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubr4A2AN08 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubr4A2AN08 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubr4A2AN08 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Ubr4A2AN08 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubr4A2AN08 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubr4A2AN08 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Gm10232-201ENSMUST00000089221 720 ntBASIC12.59□□□□□ -0.39
Ubr4A2AN08 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubr4A2AN08 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ubr4A2AN08 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubr4A2AN08 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.58□□□□□ -0.4
Ubr4A2AN08 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubr4A2AN08 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubr4A2AN08 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.57□□□□□ -0.4
Ubr4A2AN08 Pcf11-205ENSMUST00000208255 1720 ntBASIC12.57□□□□□ -0.4
Ubr4A2AN08 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC12.57□□□□□ -0.4
Ubr4A2AN08 Gm9847-201ENSMUST00000052528 599 ntBASIC12.57□□□□□ -0.4
Ubr4A2AN08 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ubr4A2AN08 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Ubr4A2AN08 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubr4A2AN08 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ubr4A2AN08 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubr4A2AN08 Gm18284-201ENSMUST00000172604 624 ntBASIC12.56□□□□□ -0.4
Ubr4A2AN08 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubr4A2AN08 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ubr4A2AN08 Gm27454-201ENSMUST00000185090 204 ntBASIC12.56□□□□□ -0.4
Ubr4A2AN08 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubr4A2AN08 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.55□□□□□ -0.4
Ubr4A2AN08 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ubr4A2AN08 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubr4A2AN08 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.55□□□□□ -0.4
Ubr4A2AN08 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubr4A2AN08 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.55□□□□□ -0.4
Ubr4A2AN08 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr4A2AN08 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr4A2AN08 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr4A2AN08 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr4A2AN08 AC122317.2-201ENSMUST00000218708 1248 ntBASIC12.54□□□□□ -0.4
Ubr4A2AN08 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ubr4A2AN08 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 128.9 ms