Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trav13n-1A0A0G2JEU8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Gm16437-201ENSMUST00000025669 507 ntBASIC16.29■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav13n-1A0A0G2JEU8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.27■□□□□ 0.2
Trav13n-1A0A0G2JEU8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.27■□□□□ 0.2
Trav13n-1A0A0G2JEU8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.27■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.26■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav13n-1A0A0G2JEU8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Cap2-205ENSMUST00000225824 1634 ntBASIC16.23■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13n-1A0A0G2JEU8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.19■□□□□ 0.18
Trav13n-1A0A0G2JEU8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-1A0A0G2JEU8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.19■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-1A0A0G2JEU8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-1A0A0G2JEU8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Gm9812-201ENSMUST00000061934 968 ntBASIC16.18■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav13n-1A0A0G2JEU8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav13n-1A0A0G2JEU8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.15■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.15■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-1A0A0G2JEU8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-1A0A0G2JEU8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.14■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms