Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ighv1-20A0A0A6YX66 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.39■□□□□ 0.53
Ighv1-20A0A0A6YX66 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-20A0A0A6YX66 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-20A0A0A6YX66 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ighv1-20A0A0A6YX66 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Ighv1-20A0A0A6YX66 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.38■□□□□ 0.53
Ighv1-20A0A0A6YX66 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-20A0A0A6YX66 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-20A0A0A6YX66 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.38■□□□□ 0.53
Ighv1-20A0A0A6YX66 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-20A0A0A6YX66 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-20A0A0A6YX66 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-20A0A0A6YX66 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-20A0A0A6YX66 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-20A0A0A6YX66 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-20A0A0A6YX66 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-20A0A0A6YX66 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-20A0A0A6YX66 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-20A0A0A6YX66 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.36■□□□□ 0.53
Ighv1-20A0A0A6YX66 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-20A0A0A6YX66 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-20A0A0A6YX66 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-20A0A0A6YX66 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.35■□□□□ 0.53
Ighv1-20A0A0A6YX66 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-20A0A0A6YX66 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.34■□□□□ 0.53
Ighv1-20A0A0A6YX66 Gm12366-201ENSMUST00000121722 873 ntBASIC18.34■□□□□ 0.53
Ighv1-20A0A0A6YX66 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.34■□□□□ 0.53
Ighv1-20A0A0A6YX66 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.34■□□□□ 0.53
Ighv1-20A0A0A6YX66 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.34■□□□□ 0.53
Ighv1-20A0A0A6YX66 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-20A0A0A6YX66 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.34■□□□□ 0.53
Ighv1-20A0A0A6YX66 Gm5786-201ENSMUST00000085368 882 ntBASIC18.34■□□□□ 0.53
Ighv1-20A0A0A6YX66 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-20A0A0A6YX66 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-20A0A0A6YX66 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ighv1-20A0A0A6YX66 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-20A0A0A6YX66 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-20A0A0A6YX66 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-20A0A0A6YX66 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-20A0A0A6YX66 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-20A0A0A6YX66 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-20A0A0A6YX66 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-20A0A0A6YX66 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-20A0A0A6YX66 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.32■□□□□ 0.52
Ighv1-20A0A0A6YX66 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-20A0A0A6YX66 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-20A0A0A6YX66 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-20A0A0A6YX66 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-20A0A0A6YX66 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.31■□□□□ 0.52
Ighv1-20A0A0A6YX66 Gm27502-201ENSMUST00000183495 199 ntBASIC18.31■□□□□ 0.52
Ighv1-20A0A0A6YX66 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.31■□□□□ 0.52
Ighv1-20A0A0A6YX66 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-20A0A0A6YX66 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ighv1-20A0A0A6YX66 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-20A0A0A6YX66 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.3■□□□□ 0.52
Ighv1-20A0A0A6YX66 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-20A0A0A6YX66 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-20A0A0A6YX66 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-20A0A0A6YX66 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.3■□□□□ 0.52
Ighv1-20A0A0A6YX66 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-20A0A0A6YX66 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-20A0A0A6YX66 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ighv1-20A0A0A6YX66 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-20A0A0A6YX66 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-20A0A0A6YX66 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.28■□□□□ 0.52
Ighv1-20A0A0A6YX66 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-20A0A0A6YX66 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-20A0A0A6YX66 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-20A0A0A6YX66 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-20A0A0A6YX66 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ighv1-20A0A0A6YX66 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-20A0A0A6YX66 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ighv1-20A0A0A6YX66 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-20A0A0A6YX66 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-20A0A0A6YX66 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.26■□□□□ 0.51
Ighv1-20A0A0A6YX66 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-20A0A0A6YX66 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.26■□□□□ 0.51
Ighv1-20A0A0A6YX66 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.26■□□□□ 0.51
Ighv1-20A0A0A6YX66 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Ighv1-20A0A0A6YX66 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-20A0A0A6YX66 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 Gm14523-201ENSMUST00000117260 558 ntBASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 Gm7332-201ENSMUST00000118351 454 ntBASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-20A0A0A6YX66 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-20A0A0A6YX66 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-20A0A0A6YX66 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-20A0A0A6YX66 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-20A0A0A6YX66 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.23■□□□□ 0.51
Ighv1-20A0A0A6YX66 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-20A0A0A6YX66 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms