Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav4d-3A0A075B625 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4d-3A0A075B625 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4d-3A0A075B625 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4d-3A0A075B625 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4d-3A0A075B625 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav4d-3A0A075B625 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4d-3A0A075B625 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4d-3A0A075B625 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav4d-3A0A075B625 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4d-3A0A075B625 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4d-3A0A075B625 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4d-3A0A075B625 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4d-3A0A075B625 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav4d-3A0A075B625 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4d-3A0A075B625 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav4d-3A0A075B625 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4d-3A0A075B625 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4d-3A0A075B625 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Peli2-204ENSMUST00000226513 1320 ntBASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Gm27322-201ENSMUST00000184007 104 ntBASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4d-3A0A075B625 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav4d-3A0A075B625 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4d-3A0A075B625 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4d-3A0A075B625 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav4d-3A0A075B625 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4d-3A0A075B625 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav4d-3A0A075B625 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4d-3A0A075B625 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4d-3A0A075B625 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4d-3A0A075B625 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4d-3A0A075B625 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4d-3A0A075B625 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4d-3A0A075B625 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4d-3A0A075B625 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav4d-3A0A075B625 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trav4d-3A0A075B625 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4d-3A0A075B625 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav4d-3A0A075B625 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4d-3A0A075B625 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4d-3A0A075B625 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4d-3A0A075B625 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4d-3A0A075B625 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4d-3A0A075B625 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.45■□□□□ 0.06
Trav4d-3A0A075B625 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav4d-3A0A075B625 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav4d-3A0A075B625 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4d-3A0A075B625 Particl-201ENSMUST00000205370 1560 ntBASIC15.44■□□□□ 0.06
Trav4d-3A0A075B625 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav4d-3A0A075B625 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav4d-3A0A075B625 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4d-3A0A075B625 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav4d-3A0A075B625 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav4d-3A0A075B625 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4d-3A0A075B625 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav4d-3A0A075B625 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4d-3A0A075B625 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4d-3A0A075B625 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4d-3A0A075B625 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Trav4d-3A0A075B625 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav4d-3A0A075B625 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4d-3A0A075B625 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4d-3A0A075B625 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4d-3A0A075B625 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.42■□□□□ 0.06
Trav4d-3A0A075B625 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav4d-3A0A075B625 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4d-3A0A075B625 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4d-3A0A075B625 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4d-3A0A075B625 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav4d-3A0A075B625 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.41■□□□□ 0.06
Trav4d-3A0A075B625 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4d-3A0A075B625 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4d-3A0A075B625 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4d-3A0A075B625 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4d-3A0A075B625 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav4d-3A0A075B625 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4d-3A0A075B625 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4d-3A0A075B625 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4d-3A0A075B625 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trav4d-3A0A075B625 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.4■□□□□ 0.06
Trav4d-3A0A075B625 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.4■□□□□ 0.06
Trav4d-3A0A075B625 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4d-3A0A075B625 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4d-3A0A075B625 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4d-3A0A075B625 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4d-3A0A075B625 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav4d-3A0A075B625 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav4d-3A0A075B625 Gm17082-201ENSMUST00000166043 1091 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms