Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShpkQ9D5J6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShpkQ9D5J6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShpkQ9D5J6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShpkQ9D5J6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.04□□□□□ -0.32
ShpkQ9D5J6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ShpkQ9D5J6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 AV356131-201ENSMUST00000206201 750 ntBASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShpkQ9D5J6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShpkQ9D5J6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShpkQ9D5J6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShpkQ9D5J6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
ShpkQ9D5J6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
ShpkQ9D5J6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
ShpkQ9D5J6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
ShpkQ9D5J6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShpkQ9D5J6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShpkQ9D5J6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShpkQ9D5J6 Gm11249-201ENSMUST00000117071 859 ntBASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShpkQ9D5J6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Gm7638-201ENSMUST00000121348 967 ntBASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Gm13158-201ENSMUST00000122007 736 ntBASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms