Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIX5Q8N196 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
SIX5Q8N196 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.85■□□□□ 0.61
SIX5Q8N196 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.85■□□□□ 0.61
SIX5Q8N196 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.85■□□□□ 0.61
SIX5Q8N196 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX5Q8N196 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX5Q8N196 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SIX5Q8N196 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX5Q8N196 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.84■□□□□ 0.61
SIX5Q8N196 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.84■□□□□ 0.61
SIX5Q8N196 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.84■□□□□ 0.61
SIX5Q8N196 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.84■□□□□ 0.61
SIX5Q8N196 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.84■□□□□ 0.61
SIX5Q8N196 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.84■□□□□ 0.61
SIX5Q8N196 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.84■□□□□ 0.61
SIX5Q8N196 AL355385.1-201ENST00000606123 409 ntBASIC18.84■□□□□ 0.61
SIX5Q8N196 AC055717.3-201ENST00000622967 595 ntBASIC18.84■□□□□ 0.61
SIX5Q8N196 AC116407.3-201ENST00000623905 1129 ntBASIC18.84■□□□□ 0.61
SIX5Q8N196 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.84■□□□□ 0.61
SIX5Q8N196 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SIX5Q8N196 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX5Q8N196 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIX5Q8N196 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIX5Q8N196 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.83■□□□□ 0.61
SIX5Q8N196 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIX5Q8N196 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SIX5Q8N196 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SIX5Q8N196 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIX5Q8N196 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SIX5Q8N196 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SIX5Q8N196 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SIX5Q8N196 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SIX5Q8N196 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX5Q8N196 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.83■□□□□ 0.6
SIX5Q8N196 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SIX5Q8N196 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX5Q8N196 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.83■□□□□ 0.6
SIX5Q8N196 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SIX5Q8N196 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.83■□□□□ 0.6
SIX5Q8N196 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
SIX5Q8N196 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIX5Q8N196 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIX5Q8N196 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX5Q8N196 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX5Q8N196 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.82■□□□□ 0.6
SIX5Q8N196 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.82■□□□□ 0.6
SIX5Q8N196 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.82■□□□□ 0.6
SIX5Q8N196 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SIX5Q8N196 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.82■□□□□ 0.6
SIX5Q8N196 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.82■□□□□ 0.6
SIX5Q8N196 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SIX5Q8N196 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.82■□□□□ 0.6
SIX5Q8N196 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.82■□□□□ 0.6
SIX5Q8N196 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.82■□□□□ 0.6
SIX5Q8N196 LINC02084-201ENST00000606069 1096 ntBASIC18.82■□□□□ 0.6
SIX5Q8N196 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 AL355877.3-201ENST00000622820 899 ntBASIC18.82■□□□□ 0.6
SIX5Q8N196 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.82■□□□□ 0.6
SIX5Q8N196 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SIX5Q8N196 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.82■□□□□ 0.6
SIX5Q8N196 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX5Q8N196 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.81■□□□□ 0.6
SIX5Q8N196 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SIX5Q8N196 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SIX5Q8N196 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIX5Q8N196 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.81■□□□□ 0.6
SIX5Q8N196 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIX5Q8N196 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SIX5Q8N196 RPS2P28-201ENST00000314255 741 ntBASIC18.81■□□□□ 0.6
SIX5Q8N196 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIX5Q8N196 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms