Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.07■□□□□ 0.64
NPAS3Q8IXF0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NPAS3Q8IXF0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.07■□□□□ 0.64
NPAS3Q8IXF0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS3Q8IXF0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS3Q8IXF0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NPAS3Q8IXF0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 AP000593.1-201ENST00000393668 712 ntBASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 POM121L3P-201ENST00000419331 1163 ntBASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 AL590627.1-203ENST00000421194 1026 ntBASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 AL671883.3-201ENST00000603274 991 ntBASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.06■□□□□ 0.64
NPAS3Q8IXF0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 RNA5SP419-201ENST00000515908 135 ntBASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NPAS3Q8IXF0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 AP001005.1-201ENST00000571755 1248 ntBASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 AC064862.7-201ENST00000604520 867 ntBASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 AL032819.2-201ENST00000624543 2162 ntBASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.04■□□□□ 0.64
NPAS3Q8IXF0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 AC096582.2-201ENST00000510860 516 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms