Protein–RNA interactions for Protein: Q61136

Prpf4b, Serine/threonine-protein kinase PRP4 homolog, mousemouse

Known RBP Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4bQ61136 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf4bQ61136 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf4bQ61136 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf4bQ61136 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf4bQ61136 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf4bQ61136 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf4bQ61136 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf4bQ61136 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf4bQ61136 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf4bQ61136 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf4bQ61136 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.83■□□□□ 0.44
Prpf4bQ61136 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.83■□□□□ 0.44
Prpf4bQ61136 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf4bQ61136 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Prpf4bQ61136 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf4bQ61136 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Prpf4bQ61136 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf4bQ61136 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.83■□□□□ 0.44
Prpf4bQ61136 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf4bQ61136 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Prpf4bQ61136 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf4bQ61136 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf4bQ61136 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.81■□□□□ 0.44
Prpf4bQ61136 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.81■□□□□ 0.44
Prpf4bQ61136 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf4bQ61136 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf4bQ61136 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Prpf4bQ61136 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf4bQ61136 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf4bQ61136 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf4bQ61136 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf4bQ61136 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf4bQ61136 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.8■□□□□ 0.44
Prpf4bQ61136 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Prpf4bQ61136 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.8■□□□□ 0.44
Prpf4bQ61136 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf4bQ61136 Gm17971-201ENSMUST00000190239 806 ntBASIC17.8■□□□□ 0.44
Prpf4bQ61136 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms