Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.35■□□□□ 0.85
CDK7P50613 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK7P50613 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK7P50613 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.35■□□□□ 0.85
CDK7P50613 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.35■□□□□ 0.85
CDK7P50613 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.35■□□□□ 0.85
CDK7P50613 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK7P50613 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CDK7P50613 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK7P50613 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK7P50613 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK7P50613 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.35■□□□□ 0.85
CDK7P50613 AL020996.1-203ENST00000536896 2307 ntBASIC20.35■□□□□ 0.85
CDK7P50613 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK7P50613 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK7P50613 AFG3L1P-217ENST00000557444 2447 ntBASIC20.34■□□□□ 0.85
CDK7P50613 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
CDK7P50613 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDK7P50613 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK7P50613 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDK7P50613 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK7P50613 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CDK7P50613 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDK7P50613 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CDK7P50613 POLD2P1-201ENST00000511220 997 ntBASIC20.34■□□□□ 0.85
CDK7P50613 AC008608.2-201ENST00000606089 416 ntBASIC20.34■□□□□ 0.85
CDK7P50613 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.34■□□□□ 0.85
CDK7P50613 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.34■□□□□ 0.85
CDK7P50613 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.34■□□□□ 0.85
CDK7P50613 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDK7P50613 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK7P50613 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK7P50613 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK7P50613 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK7P50613 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK7P50613 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK7P50613 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK7P50613 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK7P50613 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK7P50613 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK7P50613 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK7P50613 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK7P50613 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDK7P50613 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.33■□□□□ 0.85
CDK7P50613 PMS2P7-201ENST00000506558 1336 ntBASIC20.33■□□□□ 0.85
CDK7P50613 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.33■□□□□ 0.85
CDK7P50613 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.33■□□□□ 0.85
CDK7P50613 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDK7P50613 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.33■□□□□ 0.85
CDK7P50613 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK7P50613 AC092183.1-201ENST00000469884 875 ntBASIC20.33■□□□□ 0.85
CDK7P50613 RPL13AP23-201ENST00000480739 586 ntBASIC20.33■□□□□ 0.85
CDK7P50613 AC092865.5-201ENST00000545435 363 ntBASIC20.33■□□□□ 0.85
CDK7P50613 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CDK7P50613 AL049840.3-201ENST00000602669 611 ntBASIC20.33■□□□□ 0.85
CDK7P50613 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDK7P50613 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CDK7P50613 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDK7P50613 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDK7P50613 KRT8P50-201ENST00000562022 1438 ntBASIC20.33■□□□□ 0.84
CDK7P50613 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
CDK7P50613 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.33■□□□□ 0.84
CDK7P50613 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CDK7P50613 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.33■□□□□ 0.84
CDK7P50613 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CDK7P50613 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDK7P50613 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDK7P50613 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK7P50613 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CDK7P50613 AL357033.4-201ENST00000617703 1807 ntBASIC20.32■□□□□ 0.84
CDK7P50613 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.32■□□□□ 0.84
CDK7P50613 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CDK7P50613 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.32■□□□□ 0.84
CDK7P50613 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDK7P50613 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK7P50613 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDK7P50613 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDK7P50613 AC139887.3-201ENST00000568585 713 ntBASIC20.32■□□□□ 0.84
CDK7P50613 MIR7706-201ENST00000613747 67 ntBASIC20.32■□□□□ 0.84
CDK7P50613 AL355877.3-201ENST00000622820 899 ntBASIC20.32■□□□□ 0.84
CDK7P50613 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDK7P50613 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK7P50613 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK7P50613 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.31■□□□□ 0.84
CDK7P50613 Z98044.1-201ENST00000632503 1764 ntBASIC20.31■□□□□ 0.84
CDK7P50613 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK7P50613 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK7P50613 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK7P50613 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms