Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.82■□□□□ 0.6
FDFT1P37268 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FDFT1P37268 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
FDFT1P37268 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
FDFT1P37268 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.82■□□□□ 0.6
FDFT1P37268 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.82■□□□□ 0.6
FDFT1P37268 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.82■□□□□ 0.6
FDFT1P37268 AL353719.1-201ENST00000566847 864 ntBASIC18.82■□□□□ 0.6
FDFT1P37268 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FDFT1P37268 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.81■□□□□ 0.6
FDFT1P37268 ESPNP-201ENST00000270691 2015 ntBASIC18.81■□□□□ 0.6
FDFT1P37268 AC036111.1-201ENST00000533973 1582 ntBASIC18.81■□□□□ 0.6
FDFT1P37268 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.81■□□□□ 0.6
FDFT1P37268 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FDFT1P37268 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.81■□□□□ 0.6
FDFT1P37268 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.81■□□□□ 0.6
FDFT1P37268 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.81■□□□□ 0.6
FDFT1P37268 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.81■□□□□ 0.6
FDFT1P37268 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.81■□□□□ 0.6
FDFT1P37268 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.81■□□□□ 0.6
FDFT1P37268 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.81■□□□□ 0.6
FDFT1P37268 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
FDFT1P37268 KRT8P7-201ENST00000533003 1432 ntBASIC18.81■□□□□ 0.6
FDFT1P37268 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
FDFT1P37268 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FDFT1P37268 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FDFT1P37268 AC018470.1-201ENST00000624790 3129 ntBASIC18.8■□□□□ 0.6
FDFT1P37268 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.8■□□□□ 0.6
FDFT1P37268 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.8■□□□□ 0.6
FDFT1P37268 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.8■□□□□ 0.6
FDFT1P37268 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FDFT1P37268 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.8■□□□□ 0.6
FDFT1P37268 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.8■□□□□ 0.6
FDFT1P37268 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.8■□□□□ 0.6
FDFT1P37268 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.8■□□□□ 0.6
FDFT1P37268 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.8■□□□□ 0.6
FDFT1P37268 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.8■□□□□ 0.6
FDFT1P37268 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.8■□□□□ 0.6
FDFT1P37268 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 TSPY7P-201ENST00000431358 1114 ntBASIC18.8■□□□□ 0.6
FDFT1P37268 CCR12P-201ENST00000446203 998 ntBASIC18.8■□□□□ 0.6
FDFT1P37268 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
FDFT1P37268 AP003041.3-201ENST00000527151 707 ntBASIC18.8■□□□□ 0.6
FDFT1P37268 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.8■□□□□ 0.6
FDFT1P37268 FITM1-202ENST00000559294 800 ntBASIC18.8■□□□□ 0.6
FDFT1P37268 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.8■□□□□ 0.6
FDFT1P37268 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.8■□□□□ 0.6
FDFT1P37268 TMEM191A-211ENST00000637163 1067 ntBASIC18.8■□□□□ 0.6
FDFT1P37268 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
FDFT1P37268 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.8■□□□□ 0.6
FDFT1P37268 HOXB1-202ENST00000577092 1414 ntBASIC18.8■□□□□ 0.6
FDFT1P37268 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.8■□□□□ 0.6
FDFT1P37268 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FDFT1P37268 GMCL1P1-201ENST00000463439 1581 ntBASIC18.8■□□□□ 0.6
FDFT1P37268 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FDFT1P37268 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FDFT1P37268 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
FDFT1P37268 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
FDFT1P37268 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
FDFT1P37268 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms