Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.02■□□□□ 0.32
NKX2-2O95096 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 AC211429.1-201ENST00000415277 523 ntBASIC17.02■□□□□ 0.32
NKX2-2O95096 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NKX2-2O95096 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NKX2-2O95096 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.02■□□□□ 0.32
NKX2-2O95096 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NKX2-2O95096 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.02■□□□□ 0.32
NKX2-2O95096 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.02■□□□□ 0.32
NKX2-2O95096 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.02■□□□□ 0.32
NKX2-2O95096 AC092865.7-201ENST00000641832 219 ntBASIC17.02■□□□□ 0.32
NKX2-2O95096 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX2-2O95096 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX2-2O95096 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
NKX2-2O95096 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX2-2O95096 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX2-2O95096 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.02■□□□□ 0.31
NKX2-2O95096 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.02■□□□□ 0.31
NKX2-2O95096 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX2-2O95096 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX2-2O95096 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.02■□□□□ 0.31
NKX2-2O95096 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX2-2O95096 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.01■□□□□ 0.31
NKX2-2O95096 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NKX2-2O95096 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.01■□□□□ 0.31
NKX2-2O95096 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NKX2-2O95096 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NKX2-2O95096 TERF1P1-201ENST00000311003 1181 ntBASIC17.01■□□□□ 0.31
NKX2-2O95096 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.01■□□□□ 0.31
NKX2-2O95096 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX2-2O95096 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.01■□□□□ 0.31
NKX2-2O95096 ATP5G1P1-201ENST00000448724 379 ntBASIC17.01■□□□□ 0.31
NKX2-2O95096 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.01■□□□□ 0.31
NKX2-2O95096 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX2-2O95096 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NKX2-2O95096 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.01■□□□□ 0.31
NKX2-2O95096 AC073508.3-201ENST00000619697 1419 ntBASIC17.01■□□□□ 0.31
NKX2-2O95096 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NKX2-2O95096 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NKX2-2O95096 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.01■□□□□ 0.31
NKX2-2O95096 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX2-2O95096 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NKX2-2O95096 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NKX2-2O95096 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NKX2-2O95096 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17■□□□□ 0.31
NKX2-2O95096 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 AC099343.3-201ENST00000605834 2503 ntBASIC17■□□□□ 0.31
NKX2-2O95096 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17■□□□□ 0.31
NKX2-2O95096 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17■□□□□ 0.31
NKX2-2O95096 AL137013.1-201ENST00000432946 1228 ntBASIC17■□□□□ 0.31
NKX2-2O95096 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17■□□□□ 0.31
NKX2-2O95096 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17■□□□□ 0.31
NKX2-2O95096 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NKX2-2O95096 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17■□□□□ 0.31
NKX2-2O95096 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17■□□□□ 0.31
NKX2-2O95096 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17■□□□□ 0.31
NKX2-2O95096 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NKX2-2O95096 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17■□□□□ 0.31
NKX2-2O95096 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17■□□□□ 0.31
NKX2-2O95096 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17■□□□□ 0.31
NKX2-2O95096 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
NKX2-2O95096 LINC01023-201ENST00000606054 436 ntBASIC17■□□□□ 0.31
NKX2-2O95096 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NKX2-2O95096 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms