Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 UPF3AP3-201ENST00000420996 769 ntBASIC18.02■□□□□ 0.48
C4orf47A7E2U8 RPS8P6-201ENST00000426177 609 ntBASIC18.02■□□□□ 0.48
C4orf47A7E2U8 AC098831.1-202ENST00000438821 336 ntBASIC18.02■□□□□ 0.48
C4orf47A7E2U8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C4orf47A7E2U8 MIR3180-4-201ENST00000582223 153 ntBASIC18.02■□□□□ 0.48
C4orf47A7E2U8 AC114341.1-201ENST00000618070 349 ntBASIC18.02■□□□□ 0.48
C4orf47A7E2U8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.02■□□□□ 0.47
C4orf47A7E2U8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
C4orf47A7E2U8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.47
C4orf47A7E2U8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
C4orf47A7E2U8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
C4orf47A7E2U8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
C4orf47A7E2U8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
C4orf47A7E2U8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
C4orf47A7E2U8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 AL158211.5-201ENST00000623583 2518 ntBASIC18.01■□□□□ 0.47
C4orf47A7E2U8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 RPS2P28-201ENST00000314255 741 ntBASIC18.01■□□□□ 0.47
C4orf47A7E2U8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 HNRNPDP1-201ENST00000439535 754 ntBASIC18.01■□□□□ 0.47
C4orf47A7E2U8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 SCARNA2-201ENST00000458748 420 ntBASIC18.01■□□□□ 0.47
C4orf47A7E2U8 AC010327.4-202ENST00000591484 748 ntBASIC18.01■□□□□ 0.47
C4orf47A7E2U8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
C4orf47A7E2U8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
C4orf47A7E2U8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18■□□□□ 0.47
C4orf47A7E2U8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
C4orf47A7E2U8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18■□□□□ 0.47
C4orf47A7E2U8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18■□□□□ 0.47
C4orf47A7E2U8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18■□□□□ 0.47
C4orf47A7E2U8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18■□□□□ 0.47
C4orf47A7E2U8 AP001160.2-201ENST00000596071 487 ntBASIC18■□□□□ 0.47
C4orf47A7E2U8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18■□□□□ 0.47
C4orf47A7E2U8 AC027601.4-201ENST00000611259 610 ntBASIC18■□□□□ 0.47
C4orf47A7E2U8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
C4orf47A7E2U8 AL355877.3-201ENST00000622820 899 ntBASIC18■□□□□ 0.47
C4orf47A7E2U8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18■□□□□ 0.47
C4orf47A7E2U8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18■□□□□ 0.47
C4orf47A7E2U8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 AC007952.6-201ENST00000573168 2673 ntBASIC18■□□□□ 0.47
C4orf47A7E2U8 AC003957.1-201ENST00000625108 2673 ntBASIC18■□□□□ 0.47
C4orf47A7E2U8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 KATNBL1P6-202ENST00000562413 1466 ntBASIC18■□□□□ 0.47
C4orf47A7E2U8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
C4orf47A7E2U8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18■□□□□ 0.47
C4orf47A7E2U8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18■□□□□ 0.47
C4orf47A7E2U8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 AC104109.2-201ENST00000602919 1418 ntBASIC17.99■□□□□ 0.47
C4orf47A7E2U8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 AC034236.2-201ENST00000606662 1610 ntBASIC17.99■□□□□ 0.47
C4orf47A7E2U8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C4orf47A7E2U8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms