Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SPHK2Q9NRA0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SPHK2Q9NRA0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SPHK2Q9NRA0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SPHK2Q9NRA0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.83■□□□□ 0.6
SPHK2Q9NRA0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPHK2Q9NRA0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPHK2Q9NRA0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.83■□□□□ 0.6
SPHK2Q9NRA0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPHK2Q9NRA0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 TSPY19P-201ENST00000418461 509 ntBASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 TSPY18P-201ENST00000441642 509 ntBASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 UNC93B7-201ENST00000509439 705 ntBASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 AC074051.2-201ENST00000565115 352 ntBASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 Z69720.1-201ENST00000601483 472 ntBASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 AC004263.2-201ENST00000617183 678 ntBASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK2Q9NRA0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 FOSL1P1-201ENST00000511041 816 ntBASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 AC008687.5-201ENST00000593746 558 ntBASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 AL121772.3-201ENST00000610840 674 ntBASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 AC099343.3-201ENST00000605834 2503 ntBASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 LINC00167-201ENST00000530583 1419 ntBASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.81■□□□□ 0.6
SPHK2Q9NRA0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 SDHAP2-201ENST00000455183 2001 ntBASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 AC004870.1-201ENST00000315132 882 ntBASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 AL732292.2-201ENST00000609649 430 ntBASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms