Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 GPAT2P1-201ENST00000444924 1672 ntBASIC17.13■□□□□ 0.33
UBQLN3Q9H347 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBQLN3Q9H347 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 COX11P1-201ENST00000489116 835 ntBASIC17.12■□□□□ 0.33
UBQLN3Q9H347 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 WWOX-216ENST00000569818 525 ntBASIC17.12■□□□□ 0.33
UBQLN3Q9H347 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 AL590326.2-201ENST00000625139 305 ntBASIC17.12■□□□□ 0.33
UBQLN3Q9H347 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 LETM1P2-201ENST00000597330 2178 ntBASIC17.12■□□□□ 0.33
UBQLN3Q9H347 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
UBQLN3Q9H347 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 AL023284.2-201ENST00000405850 579 ntBASIC17.11■□□□□ 0.33
UBQLN3Q9H347 AK4P3-201ENST00000418260 669 ntBASIC17.11■□□□□ 0.33
UBQLN3Q9H347 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 AC139887.4-201ENST00000607877 719 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms