Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC106028.4-201ENST00000614509 607 ntBASIC18.66■□□□□ 0.58
PHOX2BQ99453 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHOX2BQ99453 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.66■□□□□ 0.58
PHOX2BQ99453 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 SMG8-203ENST00000578922 2178 ntBASIC18.65■□□□□ 0.58
PHOX2BQ99453 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 GABARAPL3-202ENST00000624044 1851 ntBASIC18.65■□□□□ 0.58
PHOX2BQ99453 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.65■□□□□ 0.58
PHOX2BQ99453 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.65■□□□□ 0.58
PHOX2BQ99453 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.65■□□□□ 0.58
PHOX2BQ99453 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 AC132008.2-207ENST00000454517 770 ntBASIC18.65■□□□□ 0.58
PHOX2BQ99453 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.65■□□□□ 0.58
PHOX2BQ99453 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.65■□□□□ 0.58
PHOX2BQ99453 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
PHOX2BQ99453 MIR5100-201ENST00000579544 119 ntBASIC18.65■□□□□ 0.58
PHOX2BQ99453 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.65■□□□□ 0.58
PHOX2BQ99453 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.65■□□□□ 0.58
PHOX2BQ99453 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.65■□□□□ 0.58
PHOX2BQ99453 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.65■□□□□ 0.58
PHOX2BQ99453 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHOX2BQ99453 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.64■□□□□ 0.58
PHOX2BQ99453 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHOX2BQ99453 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHOX2BQ99453 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHOX2BQ99453 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHOX2BQ99453 AL645939.2-201ENST00000427340 991 ntBASIC18.64■□□□□ 0.57
PHOX2BQ99453 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHOX2BQ99453 SPCS2P1-201ENST00000561636 679 ntBASIC18.64■□□□□ 0.57
PHOX2BQ99453 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHOX2BQ99453 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHOX2BQ99453 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHOX2BQ99453 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHOX2BQ99453 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
PHOX2BQ99453 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHOX2BQ99453 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHOX2BQ99453 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PHOX2BQ99453 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.63■□□□□ 0.57
PHOX2BQ99453 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 AC023274.1-201ENST00000418278 595 ntBASIC18.63■□□□□ 0.57
PHOX2BQ99453 AC004832.2-201ENST00000426397 482 ntBASIC18.63■□□□□ 0.57
PHOX2BQ99453 RN7SL606P-201ENST00000472779 293 ntBASIC18.63■□□□□ 0.57
PHOX2BQ99453 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.63■□□□□ 0.57
PHOX2BQ99453 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.63■□□□□ 0.57
PHOX2BQ99453 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHOX2BQ99453 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PHOX2BQ99453 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms