Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.73■■□□□ 1.23
RPGRQ92834 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RPGRQ92834 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
RPGRQ92834 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.73■■□□□ 1.23
RPGRQ92834 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RPGRQ92834 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
RPGRQ92834 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
RPGRQ92834 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.72■■□□□ 1.23
RPGRQ92834 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.72■■□□□ 1.23
RPGRQ92834 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
RPGRQ92834 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RPGRQ92834 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RPGRQ92834 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC22.72■■□□□ 1.23
RPGRQ92834 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 AC093909.1-201ENST00000504731 1122 ntBASIC22.72■■□□□ 1.23
RPGRQ92834 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.72■■□□□ 1.23
RPGRQ92834 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRQ92834 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.72■■□□□ 1.23
RPGRQ92834 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.72■■□□□ 1.23
RPGRQ92834 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.72■■□□□ 1.23
RPGRQ92834 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRQ92834 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.71■■□□□ 1.23
RPGRQ92834 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
RPGRQ92834 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRQ92834 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
RPGRQ92834 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRQ92834 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRQ92834 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
RPGRQ92834 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRQ92834 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRQ92834 MIR149-201ENST00000384879 89 ntBASIC22.71■■□□□ 1.23
RPGRQ92834 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.71■■□□□ 1.23
RPGRQ92834 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRQ92834 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC22.71■■□□□ 1.23
RPGRQ92834 RPP21-221ENST00000428040 594 ntTSL 2 BASIC22.71■■□□□ 1.23
RPGRQ92834 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRQ92834 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.71■■□□□ 1.23
RPGRQ92834 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.71■■□□□ 1.23
RPGRQ92834 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.71■■□□□ 1.23
RPGRQ92834 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.71■■□□□ 1.23
RPGRQ92834 AC008687.5-201ENST00000593746 558 ntBASIC22.71■■□□□ 1.23
RPGRQ92834 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.71■■□□□ 1.23
RPGRQ92834 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRQ92834 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.71■■□□□ 1.23
RPGRQ92834 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRQ92834 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
RPGRQ92834 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.71■■□□□ 1.23
RPGRQ92834 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRQ92834 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.23
RPGRQ92834 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RPGRQ92834 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RPGRQ92834 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRQ92834 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRQ92834 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRQ92834 KRT18P13-201ENST00000400056 1290 ntBASIC22.7■■□□□ 1.22
RPGRQ92834 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
RPGRQ92834 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.7■■□□□ 1.22
RPGRQ92834 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC22.7■■□□□ 1.22
RPGRQ92834 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC22.7■■□□□ 1.22
RPGRQ92834 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRQ92834 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRQ92834 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.7■■□□□ 1.22
RPGRQ92834 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRQ92834 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.7■■□□□ 1.22
RPGRQ92834 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRQ92834 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.7■■□□□ 1.22
RPGRQ92834 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRQ92834 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.22
RPGRQ92834 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRQ92834 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRQ92834 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
RPGRQ92834 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.69■■□□□ 1.22
RPGRQ92834 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRQ92834 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.69■■□□□ 1.22
RPGRQ92834 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.69■■□□□ 1.22
RPGRQ92834 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRQ92834 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
RPGRQ92834 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRQ92834 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RPGRQ92834 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.69■■□□□ 1.22
RPGRQ92834 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.69■■□□□ 1.22
RPGRQ92834 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRQ92834 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC22.69■■□□□ 1.22
RPGRQ92834 AC113404.2-201ENST00000507884 177 ntBASIC22.69■■□□□ 1.22
RPGRQ92834 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.69■■□□□ 1.22
RPGRQ92834 AC139530.3-201ENST00000620344 690 ntBASIC22.69■■□□□ 1.22
RPGRQ92834 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms