Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 SCARNA2-201ENST00000458748 420 ntBASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 AC116407.3-201ENST00000623905 1129 ntBASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC44A3Q8N4M1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 AC005104.2-201ENST00000427818 678 ntBASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 FGFR3P6-201ENST00000457012 610 ntBASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 KRT8P50-201ENST00000562022 1438 ntBASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 MTDHP3-201ENST00000594186 672 ntBASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 Z98044.1-201ENST00000632503 1764 ntBASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC44A3Q8N4M1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 AL357033.4-201ENST00000617703 1807 ntBASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 RPS2P28-201ENST00000314255 741 ntBASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SLC44A3Q8N4M1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 TP73-AS1-210ENST00000637775 1455 ntBASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 FP475955.4-201ENST00000623131 1990 ntBASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 RBM17P3-201ENST00000417687 1192 ntBASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A3Q8N4M1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms