Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 NSUN5P1-202ENST00000421140 1535 ntBASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 NSUN5P2-203ENST00000457352 1529 ntBASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 KRT18P23-201ENST00000435622 1283 ntBASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 LINC02084-201ENST00000606069 1096 ntBASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 AC139887.3-201ENST00000568585 713 ntBASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RP1L1Q8IWN7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 TP73-AS1-207ENST00000624167 988 ntBASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 BCL2-203ENST00000589955 5011 ntBASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 AL390719.2-201ENST00000606993 987 ntBASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 AC148477.8-201ENST00000624298 468 ntBASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RP1L1Q8IWN7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms