Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 AC116562.2-201ENST00000507042 360 ntBASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 AC130371.2-201ENST00000619443 611 ntBASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 AC066615.1-201ENST00000640911 628 ntBASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 AC139713.2-201ENST00000641328 2723 ntBASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 AC008764.6-201ENST00000595909 2069 ntBASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 KRT8P41-201ENST00000533985 1514 ntBASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 FSCN1P1-201ENST00000568912 1481 ntBASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 NUDT16P1-203ENST00000513809 620 ntBASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF1Q5TC12 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 AC004951.3-201ENST00000418645 1148 ntBASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms