Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KNTC1P50748 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.54■□□□□ 0.4
KNTC1P50748 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.54■□□□□ 0.4
KNTC1P50748 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.54■□□□□ 0.4
KNTC1P50748 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.54■□□□□ 0.4
KNTC1P50748 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.54■□□□□ 0.4
KNTC1P50748 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.54■□□□□ 0.4
KNTC1P50748 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KNTC1P50748 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KNTC1P50748 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KNTC1P50748 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KNTC1P50748 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KNTC1P50748 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
KNTC1P50748 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.53■□□□□ 0.4
KNTC1P50748 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.53■□□□□ 0.4
KNTC1P50748 AC132008.2-207ENST00000454517 770 ntBASIC17.53■□□□□ 0.4
KNTC1P50748 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.53■□□□□ 0.4
KNTC1P50748 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.53■□□□□ 0.4
KNTC1P50748 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.53■□□□□ 0.4
KNTC1P50748 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.53■□□□□ 0.4
KNTC1P50748 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.53■□□□□ 0.4
KNTC1P50748 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
KNTC1P50748 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.53■□□□□ 0.4
KNTC1P50748 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KNTC1P50748 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.53■□□□□ 0.4
KNTC1P50748 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
KNTC1P50748 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.53■□□□□ 0.4
KNTC1P50748 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.53■□□□□ 0.4
KNTC1P50748 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.53■□□□□ 0.4
KNTC1P50748 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KNTC1P50748 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
KNTC1P50748 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KNTC1P50748 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KNTC1P50748 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.52■□□□□ 0.4
KNTC1P50748 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KNTC1P50748 AC093909.1-201ENST00000504731 1122 ntBASIC17.52■□□□□ 0.4
KNTC1P50748 MIR5100-201ENST00000579544 119 ntBASIC17.52■□□□□ 0.4
KNTC1P50748 AP001160.2-201ENST00000596071 487 ntBASIC17.52■□□□□ 0.4
KNTC1P50748 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KNTC1P50748 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KNTC1P50748 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KNTC1P50748 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.52■□□□□ 0.4
KNTC1P50748 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KNTC1P50748 KRT8P32-201ENST00000512863 1461 ntBASIC17.52■□□□□ 0.4
KNTC1P50748 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KNTC1P50748 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KNTC1P50748 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.52■□□□□ 0.39
KNTC1P50748 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
KNTC1P50748 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.52■□□□□ 0.39
KNTC1P50748 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.52■□□□□ 0.39
KNTC1P50748 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
KNTC1P50748 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.52■□□□□ 0.39
KNTC1P50748 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.52■□□□□ 0.39
KNTC1P50748 SART3-203ENST00000546611 1184 ntBASIC17.52■□□□□ 0.39
KNTC1P50748 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
KNTC1P50748 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
KNTC1P50748 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KNTC1P50748 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KNTC1P50748 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.51■□□□□ 0.39
KNTC1P50748 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KNTC1P50748 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KNTC1P50748 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KNTC1P50748 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KNTC1P50748 MIR940-201ENST00000401276 94 ntBASIC17.51■□□□□ 0.39
KNTC1P50748 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.51■□□□□ 0.39
KNTC1P50748 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.51■□□□□ 0.39
KNTC1P50748 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.51■□□□□ 0.39
KNTC1P50748 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.51■□□□□ 0.39
KNTC1P50748 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.51■□□□□ 0.39
KNTC1P50748 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.51■□□□□ 0.39
KNTC1P50748 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.51■□□□□ 0.39
KNTC1P50748 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.51■□□□□ 0.39
KNTC1P50748 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KNTC1P50748 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.51■□□□□ 0.39
KNTC1P50748 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.51■□□□□ 0.39
KNTC1P50748 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KNTC1P50748 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
KNTC1P50748 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KNTC1P50748 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
KNTC1P50748 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.51■□□□□ 0.39
KNTC1P50748 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.51■□□□□ 0.39
KNTC1P50748 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.51■□□□□ 0.39
KNTC1P50748 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
KNTC1P50748 AC096582.2-201ENST00000510860 516 ntBASIC17.51■□□□□ 0.39
KNTC1P50748 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KNTC1P50748 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
KNTC1P50748 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms