Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLC1A1P43005 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC1A1P43005 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC1A1P43005 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC1A1P43005 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC1A1P43005 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC1A1P43005 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC1A1P43005 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A1P43005 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A1P43005 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A1P43005 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC1A1P43005 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A1P43005 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A1P43005 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC1A1P43005 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A1P43005 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A1P43005 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC1A1P43005 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC1A1P43005 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A1P43005 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC1A1P43005 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC1A1P43005 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A1P43005 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC1A1P43005 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A1P43005 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A1P43005 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC1A1P43005 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A1P43005 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SLC1A1P43005 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC1A1P43005 KRT8P7-201ENST00000533003 1432 ntBASIC19.34■□□□□ 0.69
SLC1A1P43005 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC1A1P43005 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC1A1P43005 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC1A1P43005 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC1A1P43005 SLC25A1P2-201ENST00000430693 912 ntBASIC19.34■□□□□ 0.69
SLC1A1P43005 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC1A1P43005 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.34■□□□□ 0.69
SLC1A1P43005 MIR4674-201ENST00000582457 87 ntBASIC19.34■□□□□ 0.69
SLC1A1P43005 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC1A1P43005 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.34■□□□□ 0.69
SLC1A1P43005 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC1A1P43005 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 AC036111.1-201ENST00000533973 1582 ntBASIC19.34■□□□□ 0.69
SLC1A1P43005 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC1A1P43005 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC1A1P43005 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 HOXB1-202ENST00000577092 1414 ntBASIC19.34■□□□□ 0.69
SLC1A1P43005 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.34■□□□□ 0.69
SLC1A1P43005 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A1P43005 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC1A1P43005 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.33■□□□□ 0.69
SLC1A1P43005 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.33■□□□□ 0.69
SLC1A1P43005 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.33■□□□□ 0.69
SLC1A1P43005 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC1A1P43005 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SLC1A1P43005 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.33■□□□□ 0.69
SLC1A1P43005 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC1A1P43005 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC1A1P43005 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC1A1P43005 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A1P43005 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC1A1P43005 AL023803.3-201ENST00000615559 522 ntBASIC19.33■□□□□ 0.68
SLC1A1P43005 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.33■□□□□ 0.68
SLC1A1P43005 AL163051.1-201ENST00000569214 1512 ntBASIC19.33■□□□□ 0.68
SLC1A1P43005 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A1P43005 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A1P43005 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A1P43005 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A1P43005 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLC1A1P43005 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A1P43005 AC138932.1-201ENST00000534164 6830 ntBASIC19.33■□□□□ 0.68
SLC1A1P43005 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC1A1P43005 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A1P43005 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 AC005332.8-201ENST00000622750 2735 ntBASIC19.32■□□□□ 0.68
SLC1A1P43005 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SLC1A1P43005 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC1A1P43005 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SLC1A1P43005 FLJ13224-201ENST00000313737 1514 ntBASIC19.32■□□□□ 0.68
SLC1A1P43005 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC1A1P43005 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms