Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN3P26045 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN3P26045 AL163051.1-201ENST00000569214 1512 ntBASIC18.84■□□□□ 0.61
PTPN3P26045 AC135776.1-201ENST00000319817 2481 ntBASIC18.84■□□□□ 0.61
PTPN3P26045 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN3P26045 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN3P26045 ABALON-201ENST00000629058 1903 ntBASIC18.84■□□□□ 0.61
PTPN3P26045 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN3P26045 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN3P26045 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN3P26045 HCG11-201ENST00000411553 5696 ntBASIC18.84■□□□□ 0.61
PTPN3P26045 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN3P26045 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.84■□□□□ 0.61
PTPN3P26045 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN3P26045 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN3P26045 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.84■□□□□ 0.61
PTPN3P26045 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN3P26045 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN3P26045 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PTPN3P26045 ESPNP-201ENST00000270691 2015 ntBASIC18.84■□□□□ 0.61
PTPN3P26045 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN3P26045 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN3P26045 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN3P26045 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN3P26045 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN3P26045 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN3P26045 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.83■□□□□ 0.61
PTPN3P26045 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN3P26045 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN3P26045 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN3P26045 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.83■□□□□ 0.61
PTPN3P26045 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN3P26045 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PTPN3P26045 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN3P26045 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PTPN3P26045 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN3P26045 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN3P26045 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.83■□□□□ 0.61
PTPN3P26045 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PTPN3P26045 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN3P26045 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN3P26045 HMGA1P5-201ENST00000412453 271 ntBASIC18.83■□□□□ 0.6
PTPN3P26045 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN3P26045 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN3P26045 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN3P26045 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN3P26045 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
PTPN3P26045 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN3P26045 AC112497.1-201ENST00000624824 639 ntBASIC18.83■□□□□ 0.6
PTPN3P26045 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PTPN3P26045 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN3P26045 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
PTPN3P26045 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN3P26045 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN3P26045 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PTPN3P26045 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
PTPN3P26045 AC093677.2-201ENST00000600169 1863 ntBASIC18.82■□□□□ 0.6
PTPN3P26045 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PTPN3P26045 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN3P26045 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PTPN3P26045 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN3P26045 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.82■□□□□ 0.6
PTPN3P26045 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN3P26045 AC009947.2-201ENST00000444014 672 ntBASIC18.82■□□□□ 0.6
PTPN3P26045 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.82■□□□□ 0.6
PTPN3P26045 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN3P26045 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN3P26045 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.82■□□□□ 0.6
PTPN3P26045 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN3P26045 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PTPN3P26045 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN3P26045 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTPN3P26045 SDHAP2-201ENST00000455183 2001 ntBASIC18.81■□□□□ 0.6
PTPN3P26045 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTPN3P26045 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN3P26045 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms