Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.23■□□□□ 0.51
BCKDHBP21953 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BCKDHBP21953 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BCKDHBP21953 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.23■□□□□ 0.51
BCKDHBP21953 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.23■□□□□ 0.51
BCKDHBP21953 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BCKDHBP21953 AC093909.1-201ENST00000504731 1122 ntBASIC18.23■□□□□ 0.51
BCKDHBP21953 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.23■□□□□ 0.51
BCKDHBP21953 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BCKDHBP21953 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.23■□□□□ 0.51
BCKDHBP21953 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.23■□□□□ 0.51
BCKDHBP21953 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.23■□□□□ 0.51
BCKDHBP21953 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.23■□□□□ 0.51
BCKDHBP21953 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.23■□□□□ 0.51
BCKDHBP21953 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
BCKDHBP21953 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BCKDHBP21953 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.23■□□□□ 0.51
BCKDHBP21953 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.23■□□□□ 0.51
BCKDHBP21953 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BCKDHBP21953 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.23■□□□□ 0.51
BCKDHBP21953 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.23■□□□□ 0.51
BCKDHBP21953 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
BCKDHBP21953 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
BCKDHBP21953 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.22■□□□□ 0.51
BCKDHBP21953 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 MIR1233-2-201ENST00000408138 82 ntBASIC18.22■□□□□ 0.51
BCKDHBP21953 MIR1233-1-201ENST00000408722 82 ntBASIC18.22■□□□□ 0.51
BCKDHBP21953 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.22■□□□□ 0.51
BCKDHBP21953 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
BCKDHBP21953 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.22■□□□□ 0.51
BCKDHBP21953 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
BCKDHBP21953 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.22■□□□□ 0.51
BCKDHBP21953 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
BCKDHBP21953 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 AL163051.1-201ENST00000569214 1512 ntBASIC18.22■□□□□ 0.51
BCKDHBP21953 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BCKDHBP21953 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.22■□□□□ 0.51
BCKDHBP21953 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
BCKDHBP21953 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.22■□□□□ 0.51
BCKDHBP21953 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
BCKDHBP21953 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BCKDHBP21953 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
BCKDHBP21953 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
BCKDHBP21953 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
BCKDHBP21953 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BCKDHBP21953 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BCKDHBP21953 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.21■□□□□ 0.51
BCKDHBP21953 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.21■□□□□ 0.51
BCKDHBP21953 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BCKDHBP21953 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BCKDHBP21953 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
BCKDHBP21953 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.21■□□□□ 0.51
BCKDHBP21953 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
BCKDHBP21953 HNRNPDP1-201ENST00000439535 754 ntBASIC18.21■□□□□ 0.51
BCKDHBP21953 RPL13AP23-201ENST00000480739 586 ntBASIC18.21■□□□□ 0.51
BCKDHBP21953 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.21■□□□□ 0.51
BCKDHBP21953 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.21■□□□□ 0.51
BCKDHBP21953 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
BCKDHBP21953 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
BCKDHBP21953 AC005336.2-201ENST00000593183 939 ntBASIC18.21■□□□□ 0.51
BCKDHBP21953 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.21■□□□□ 0.51
BCKDHBP21953 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
BCKDHBP21953 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.21■□□□□ 0.51
BCKDHBP21953 HEIH-201ENST00000623091 1652 ntBASIC18.21■□□□□ 0.51
BCKDHBP21953 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
BCKDHBP21953 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
BCKDHBP21953 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.21■□□□□ 0.51
BCKDHBP21953 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.2■□□□□ 0.5
BCKDHBP21953 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BCKDHBP21953 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
BCKDHBP21953 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
BCKDHBP21953 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BCKDHBP21953 MTMR9LP-203ENST00000426597 1545 ntBASIC18.2■□□□□ 0.5
BCKDHBP21953 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.2■□□□□ 0.5
BCKDHBP21953 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.2■□□□□ 0.5
BCKDHBP21953 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.2■□□□□ 0.5
BCKDHBP21953 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
BCKDHBP21953 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.2■□□□□ 0.5
BCKDHBP21953 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.2■□□□□ 0.5
BCKDHBP21953 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.2■□□□□ 0.5
BCKDHBP21953 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.2■□□□□ 0.5
BCKDHBP21953 FGFR3P6-201ENST00000457012 610 ntBASIC18.2■□□□□ 0.5
BCKDHBP21953 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.2■□□□□ 0.5
BCKDHBP21953 AC073648.2-201ENST00000510116 352 ntBASIC18.2■□□□□ 0.5
BCKDHBP21953 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.2■□□□□ 0.5
BCKDHBP21953 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.2■□□□□ 0.5
BCKDHBP21953 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms