Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 RCN1P2-201ENST00000398357 915 ntBASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 HIST2H3DP1-201ENST00000401004 416 ntBASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 RPL13AP23-201ENST00000480739 586 ntBASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 AC073648.2-201ENST00000510116 352 ntBASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 MIR7706-201ENST00000613747 67 ntBASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CSB-PGBD3P0DP91 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 PMS2P7-201ENST00000506558 1336 ntBASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 AC018712.1-201ENST00000455767 687 ntBASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.42■■□□□ 1.5
CSB-PGBD3P0DP91 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 HEIH-201ENST00000623091 1652 ntBASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 AC139887.3-201ENST00000568585 713 ntBASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 LITAF-211ENST00000572255 516 ntTSL 4 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
CSB-PGBD3P0DP91 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 FABP5-202ENST00000396359 986 ntTSL 5 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 RPL18-209ENST00000550645 463 ntTSL 5 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 RPL18-214ENST00000552588 559 ntTSL 3 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 PRKN-208ENST00000610470 531 ntTSL 2 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 PRKN-209ENST00000612485 225 ntTSL 5 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 AL355877.3-201ENST00000622820 899 ntBASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC24.4■■□□□ 1.5
CSB-PGBD3P0DP91 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CSB-PGBD3P0DP91 AC099343.3-201ENST00000605834 2503 ntBASIC24.39■■□□□ 1.5
CSB-PGBD3P0DP91 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CSB-PGBD3P0DP91 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC24.39■■□□□ 1.5
CSB-PGBD3P0DP91 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
CSB-PGBD3P0DP91 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC24.39■■□□□ 1.49
CSB-PGBD3P0DP91 COX5A-204ENST00000567270 579 ntTSL 3 BASIC24.39■■□□□ 1.49
CSB-PGBD3P0DP91 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC24.39■■□□□ 1.49
CSB-PGBD3P0DP91 MTDHP3-201ENST00000594186 672 ntBASIC24.39■■□□□ 1.49
CSB-PGBD3P0DP91 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CSB-PGBD3P0DP91 FAM215A-202ENST00000632077 792 ntBASIC24.39■■□□□ 1.49
CSB-PGBD3P0DP91 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CSB-PGBD3P0DP91 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CSB-PGBD3P0DP91 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms