Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.85■□□□□ 0.93
HOXC6P09630 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC6P09630 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC6P09630 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXC6P09630 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXC6P09630 AL163051.1-201ENST00000569214 1512 ntBASIC20.84■□□□□ 0.93
HOXC6P09630 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC6P09630 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC6P09630 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.84■□□□□ 0.93
HOXC6P09630 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC6P09630 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC6P09630 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HOXC6P09630 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC6P09630 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
HOXC6P09630 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HOXC6P09630 AC018712.1-201ENST00000455767 687 ntBASIC20.84■□□□□ 0.93
HOXC6P09630 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.84■□□□□ 0.93
HOXC6P09630 AC113404.2-201ENST00000507884 177 ntBASIC20.84■□□□□ 0.93
HOXC6P09630 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.84■□□□□ 0.93
HOXC6P09630 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.84■□□□□ 0.93
HOXC6P09630 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.84■□□□□ 0.93
HOXC6P09630 AC148477.8-201ENST00000624298 468 ntBASIC20.84■□□□□ 0.93
HOXC6P09630 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXC6P09630 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXC6P09630 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXC6P09630 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC6P09630 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC6P09630 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.83■□□□□ 0.93
HOXC6P09630 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.83■□□□□ 0.93
HOXC6P09630 HEIH-201ENST00000623091 1652 ntBASIC20.83■□□□□ 0.93
HOXC6P09630 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC6P09630 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC6P09630 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.83■□□□□ 0.93
HOXC6P09630 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC6P09630 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC6P09630 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC6P09630 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC6P09630 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXC6P09630 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
HOXC6P09630 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXC6P09630 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXC6P09630 KRT18P13-201ENST00000400056 1290 ntBASIC20.83■□□□□ 0.93
HOXC6P09630 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXC6P09630 RNPS1P1-201ENST00000507437 918 ntBASIC20.83■□□□□ 0.93
HOXC6P09630 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXC6P09630 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
HOXC6P09630 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXC6P09630 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC6P09630 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
HOXC6P09630 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
HOXC6P09630 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.83■□□□□ 0.92
HOXC6P09630 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HOXC6P09630 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HOXC6P09630 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC6P09630 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC6P09630 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC6P09630 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC6P09630 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HOXC6P09630 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
HOXC6P09630 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXC6P09630 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC6P09630 AC132008.2-207ENST00000454517 770 ntBASIC20.82■□□□□ 0.92
HOXC6P09630 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXC6P09630 KRT18P58-201ENST00000527480 1120 ntBASIC20.82■□□□□ 0.92
HOXC6P09630 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.82■□□□□ 0.92
HOXC6P09630 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXC6P09630 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXC6P09630 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HOXC6P09630 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXC6P09630 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC6P09630 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HOXC6P09630 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXC6P09630 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC6P09630 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXC6P09630 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXC6P09630 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXC6P09630 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC6P09630 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HOXC6P09630 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HOXC6P09630 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC6P09630 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC6P09630 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC6P09630 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC6P09630 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HOXC6P09630 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC6P09630 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC6P09630 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
HOXC6P09630 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC6P09630 AC096582.2-201ENST00000510860 516 ntBASIC20.81■□□□□ 0.92
HOXC6P09630 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC6P09630 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC6P09630 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC6P09630 AC106730.1-201ENST00000566722 1090 ntBASIC20.81■□□□□ 0.92
HOXC6P09630 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.81■□□□□ 0.92
HOXC6P09630 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC6P09630 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.81■□□□□ 0.92
HOXC6P09630 AC008608.2-201ENST00000606089 416 ntBASIC20.81■□□□□ 0.92
HOXC6P09630 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms