Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH16O75309 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH16O75309 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH16O75309 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDH16O75309 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH16O75309 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH16O75309 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH16O75309 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH16O75309 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH16O75309 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.69■□□□□ 0.58
CDH16O75309 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH16O75309 AC083880.1-201ENST00000608266 535 ntBASIC18.69■□□□□ 0.58
CDH16O75309 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH16O75309 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH16O75309 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDH16O75309 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH16O75309 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH16O75309 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH16O75309 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDH16O75309 HTR7P1-201ENST00000538670 1336 ntBASIC18.69■□□□□ 0.58
CDH16O75309 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH16O75309 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDH16O75309 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH16O75309 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH16O75309 AL645608.8-201ENST00000606034 2086 ntBASIC18.69■□□□□ 0.58
CDH16O75309 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
CDH16O75309 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDH16O75309 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.68■□□□□ 0.58
CDH16O75309 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH16O75309 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH16O75309 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDH16O75309 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.68■□□□□ 0.58
CDH16O75309 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH16O75309 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.68■□□□□ 0.58
CDH16O75309 KRT18P41-201ENST00000518924 1277 ntBASIC18.68■□□□□ 0.58
CDH16O75309 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.68■□□□□ 0.58
CDH16O75309 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.68■□□□□ 0.58
CDH16O75309 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.68■□□□□ 0.58
CDH16O75309 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.68■□□□□ 0.58
CDH16O75309 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH16O75309 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH16O75309 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDH16O75309 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH16O75309 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDH16O75309 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH16O75309 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH16O75309 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH16O75309 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH16O75309 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH16O75309 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH16O75309 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH16O75309 POM121L13P-201ENST00000422362 380 ntBASIC18.67■□□□□ 0.58
CDH16O75309 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.67■□□□□ 0.58
CDH16O75309 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.67■□□□□ 0.58
CDH16O75309 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.67■□□□□ 0.58
CDH16O75309 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDH16O75309 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CDH16O75309 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH16O75309 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CDH16O75309 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CDH16O75309 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDH16O75309 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH16O75309 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH16O75309 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH16O75309 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH16O75309 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDH16O75309 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH16O75309 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDH16O75309 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDH16O75309 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH16O75309 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH16O75309 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
CDH16O75309 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH16O75309 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH16O75309 UNC93B4-201ENST00000505679 747 ntBASIC18.66■□□□□ 0.58
CDH16O75309 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CDH16O75309 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH16O75309 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH16O75309 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms