Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 ELP6-205ENST00000439305 880 ntTSL 2 BASIC25.53■■□□□ 1.68
BRD4O60885 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC25.53■■□□□ 1.68
BRD4O60885 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC25.53■■□□□ 1.68
BRD4O60885 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
BRD4O60885 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC25.53■■□□□ 1.68
BRD4O60885 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC25.53■■□□□ 1.68
BRD4O60885 AL390719.2-201ENST00000606993 987 ntBASIC25.53■■□□□ 1.68
BRD4O60885 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
BRD4O60885 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
BRD4O60885 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
BRD4O60885 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
BRD4O60885 HEIH-201ENST00000623091 1652 ntBASIC25.52■■□□□ 1.68
BRD4O60885 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
BRD4O60885 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
BRD4O60885 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
BRD4O60885 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
BRD4O60885 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
BRD4O60885 KRT8P32-201ENST00000512863 1461 ntBASIC25.52■■□□□ 1.68
BRD4O60885 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
BRD4O60885 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC25.52■■□□□ 1.68
BRD4O60885 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
BRD4O60885 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
BRD4O60885 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC25.52■■□□□ 1.68
BRD4O60885 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC25.52■■□□□ 1.68
BRD4O60885 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC25.52■■□□□ 1.68
BRD4O60885 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.68
BRD4O60885 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC25.51■■□□□ 1.67
BRD4O60885 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC25.51■■□□□ 1.67
BRD4O60885 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC25.51■■□□□ 1.67
BRD4O60885 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
BRD4O60885 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC25.51■■□□□ 1.67
BRD4O60885 AC090616.6-201ENST00000582640 721 ntBASIC25.51■■□□□ 1.67
BRD4O60885 AC068587.9-201ENST00000641814 219 ntBASIC25.51■■□□□ 1.67
BRD4O60885 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC25.51■■□□□ 1.67
BRD4O60885 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
BRD4O60885 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
BRD4O60885 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BRD4O60885 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BRD4O60885 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BRD4O60885 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
BRD4O60885 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
BRD4O60885 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC25.5■■□□□ 1.67
BRD4O60885 KLK8-205ENST00000593490 267 ntTSL 3 BASIC25.5■■□□□ 1.67
BRD4O60885 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BRD4O60885 MTMR9LP-203ENST00000426597 1545 ntBASIC25.5■■□□□ 1.67
BRD4O60885 ANO7L1-203ENST00000602586 1720 ntBASIC25.5■■□□□ 1.67
BRD4O60885 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BRD4O60885 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
BRD4O60885 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
BRD4O60885 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
BRD4O60885 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
BRD4O60885 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
BRD4O60885 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
BRD4O60885 AL845331.1-201ENST00000424978 1190 ntBASIC25.49■■□□□ 1.67
BRD4O60885 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
BRD4O60885 AL121772.3-201ENST00000610840 674 ntBASIC25.49■■□□□ 1.67
BRD4O60885 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
BRD4O60885 AC008556.1-201ENST00000610908 2040 ntBASIC25.49■■□□□ 1.67
BRD4O60885 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
BRD4O60885 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC25.49■■□□□ 1.67
BRD4O60885 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
BRD4O60885 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
BRD4O60885 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC25.49■■□□□ 1.67
BRD4O60885 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC25.49■■□□□ 1.67
BRD4O60885 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
BRD4O60885 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC25.49■■□□□ 1.67
BRD4O60885 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
BRD4O60885 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
BRD4O60885 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
BRD4O60885 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BRD4O60885 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
BRD4O60885 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC25.48■■□□□ 1.67
BRD4O60885 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
BRD4O60885 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
BRD4O60885 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BRD4O60885 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BRD4O60885 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BRD4O60885 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
BRD4O60885 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
BRD4O60885 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
BRD4O60885 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
BRD4O60885 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC25.47■■□□□ 1.67
BRD4O60885 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
BRD4O60885 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC25.47■■□□□ 1.67
BRD4O60885 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
BRD4O60885 AC104692.2-201ENST00000603054 253 ntBASIC25.47■■□□□ 1.67
BRD4O60885 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
BRD4O60885 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC25.47■■□□□ 1.67
BRD4O60885 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms