Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 MFAP1P1-201ENST00000442257 1255 ntBASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 FAM201B-201ENST00000458407 597 ntBASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 NUDT16P1-203ENST00000513809 620 ntBASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 SLC25A1P4-201ENST00000567977 778 ntBASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 REXO1L9P-201ENST00000604264 2108 ntBASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 AC034236.2-201ENST00000606662 1610 ntBASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA3Q9Y5H8 KRT8P50-201ENST00000562022 1438 ntBASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 CA15P1-201ENST00000481698 905 ntBASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHA3Q9Y5H8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PCDHA3Q9Y5H8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHA3Q9Y5H8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
PCDHA3Q9Y5H8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHA3Q9Y5H8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHA3Q9Y5H8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHA3Q9Y5H8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PCDHA3Q9Y5H8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 KRT18P29-201ENST00000397031 1267 ntBASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 AC097488.1-201ENST00000507834 756 ntBASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA3Q9Y5H8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms