Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.89■□□□□ 0.77
CNTN3Q9P232 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.89■□□□□ 0.77
CNTN3Q9P232 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.89■□□□□ 0.77
CNTN3Q9P232 RNF126P1-202ENST00000569893 925 ntBASIC19.89■□□□□ 0.77
CNTN3Q9P232 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.89■□□□□ 0.77
CNTN3Q9P232 ANO7L1-203ENST00000602586 1720 ntBASIC19.89■□□□□ 0.77
CNTN3Q9P232 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTN3Q9P232 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTN3Q9P232 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTN3Q9P232 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTN3Q9P232 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTN3Q9P232 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 AC009102.3-201ENST00000623118 1491 ntBASIC19.88■□□□□ 0.77
CNTN3Q9P232 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTN3Q9P232 ATP5G2P1-201ENST00000433580 426 ntBASIC19.88■□□□□ 0.77
CNTN3Q9P232 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTN3Q9P232 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTN3Q9P232 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTN3Q9P232 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CNTN3Q9P232 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTN3Q9P232 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CNTN3Q9P232 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CNTN3Q9P232 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTN3Q9P232 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTN3Q9P232 AC016734.2-201ENST00000624325 1377 ntBASIC19.87■□□□□ 0.77
CNTN3Q9P232 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTN3Q9P232 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTN3Q9P232 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTN3Q9P232 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CNTN3Q9P232 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTN3Q9P232 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTN3Q9P232 KRT8P26-201ENST00000534154 1276 ntBASIC19.87■□□□□ 0.77
CNTN3Q9P232 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.87■□□□□ 0.77
CNTN3Q9P232 AC024563.2-201ENST00000603282 481 ntBASIC19.87■□□□□ 0.77
CNTN3Q9P232 AL121672.3-201ENST00000608644 468 ntBASIC19.87■□□□□ 0.77
CNTN3Q9P232 NPAP1P7-201ENST00000613027 823 ntBASIC19.87■□□□□ 0.77
CNTN3Q9P232 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTN3Q9P232 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTN3Q9P232 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTN3Q9P232 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTN3Q9P232 AL031598.1-201ENST00000561511 1773 ntBASIC19.87■□□□□ 0.77
CNTN3Q9P232 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTN3Q9P232 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTN3Q9P232 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTN3Q9P232 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.87■□□□□ 0.77
CNTN3Q9P232 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 KRT89P-201ENST00000620027 1478 ntBASIC19.86■□□□□ 0.77
CNTN3Q9P232 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 KRT18P48-201ENST00000434763 852 ntBASIC19.86■□□□□ 0.77
CNTN3Q9P232 BX276092.5-203ENST00000456199 560 ntBASIC19.86■□□□□ 0.77
CNTN3Q9P232 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 AP003733.1-201ENST00000491725 852 ntBASIC19.86■□□□□ 0.77
CNTN3Q9P232 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTN3Q9P232 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTN3Q9P232 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms