Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20■□□□□ 0.79
HERC6Q8IVU3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HERC6Q8IVU3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20■□□□□ 0.79
HERC6Q8IVU3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HERC6Q8IVU3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20■□□□□ 0.79
HERC6Q8IVU3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20■□□□□ 0.79
HERC6Q8IVU3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HERC6Q8IVU3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HERC6Q8IVU3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 AC243591.1-201ENST00000452967 1364 ntBASIC19.99■□□□□ 0.79
HERC6Q8IVU3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 PMS2P7-201ENST00000506558 1336 ntBASIC19.99■□□□□ 0.79
HERC6Q8IVU3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HERC6Q8IVU3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 MIR5100-201ENST00000579544 119 ntBASIC19.98■□□□□ 0.79
HERC6Q8IVU3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 BNIP3P18-201ENST00000593976 575 ntBASIC19.98■□□□□ 0.79
HERC6Q8IVU3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HERC6Q8IVU3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 FAM220CP-201ENST00000395253 831 ntBASIC19.97■□□□□ 0.79
HERC6Q8IVU3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 TERC-201ENST00000602385 541 ntBASIC19.97■□□□□ 0.79
HERC6Q8IVU3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 KRT89P-201ENST00000620027 1478 ntBASIC19.97■□□□□ 0.79
HERC6Q8IVU3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HERC6Q8IVU3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 Z82202.1-201ENST00000623446 1880 ntBASIC19.96■□□□□ 0.79
HERC6Q8IVU3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 BX842568.4-201ENST00000421222 227 ntBASIC19.96■□□□□ 0.79
HERC6Q8IVU3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 KRT8P32-201ENST00000512863 1461 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms