Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC104417.2-201ENST00000562989 1793 ntBASIC19.6■□□□□ 0.73
RNF135Q8IUD6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 Z82202.1-201ENST00000623446 1880 ntBASIC19.59■□□□□ 0.73
RNF135Q8IUD6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF135Q8IUD6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF135Q8IUD6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF135Q8IUD6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF135Q8IUD6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF135Q8IUD6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RNF135Q8IUD6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF135Q8IUD6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RNF135Q8IUD6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF135Q8IUD6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF135Q8IUD6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF135Q8IUD6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
RNF135Q8IUD6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF135Q8IUD6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF135Q8IUD6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF135Q8IUD6 RNF126P1-202ENST00000569893 925 ntBASIC19.58■□□□□ 0.72
RNF135Q8IUD6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF135Q8IUD6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF135Q8IUD6 AC093484.2-201ENST00000580996 2166 ntBASIC19.58■□□□□ 0.72
RNF135Q8IUD6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF135Q8IUD6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF135Q8IUD6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 AC074051.2-201ENST00000565115 352 ntBASIC19.57■□□□□ 0.72
RNF135Q8IUD6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 AP001005.1-201ENST00000571755 1248 ntBASIC19.57■□□□□ 0.72
RNF135Q8IUD6 AL136038.4-201ENST00000603606 1261 ntBASIC19.57■□□□□ 0.72
RNF135Q8IUD6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 AC020763.4-201ENST00000623414 4170 ntBASIC19.57■□□□□ 0.72
RNF135Q8IUD6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF135Q8IUD6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 KRT18P58-201ENST00000527480 1120 ntBASIC19.56■□□□□ 0.72
RNF135Q8IUD6 SLC25A1P1-201ENST00000528351 927 ntBASIC19.56■□□□□ 0.72
RNF135Q8IUD6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 AC064862.7-201ENST00000604520 867 ntBASIC19.56■□□□□ 0.72
RNF135Q8IUD6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RNF135Q8IUD6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF135Q8IUD6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms