Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 TP73-AS1-207ENST00000624167 988 ntBASIC20.59■□□□□ 0.89
SMPD1P17405 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMPD1P17405 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.59■□□□□ 0.89
SMPD1P17405 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMPD1P17405 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMPD1P17405 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.59■□□□□ 0.89
SMPD1P17405 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMPD1P17405 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.59■□□□□ 0.89
SMPD1P17405 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.59■□□□□ 0.89
SMPD1P17405 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMPD1P17405 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMPD1P17405 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMPD1P17405 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMPD1P17405 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.58■□□□□ 0.89
SMPD1P17405 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMPD1P17405 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
SMPD1P17405 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.58■□□□□ 0.89
SMPD1P17405 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMPD1P17405 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMPD1P17405 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMPD1P17405 POM121L3P-201ENST00000419331 1163 ntBASIC20.58■□□□□ 0.89
SMPD1P17405 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.58■□□□□ 0.89
SMPD1P17405 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.58■□□□□ 0.89
SMPD1P17405 AL049812.1-201ENST00000432563 2267 ntBASIC20.58■□□□□ 0.88
SMPD1P17405 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMPD1P17405 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.58■□□□□ 0.88
SMPD1P17405 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMPD1P17405 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.58■□□□□ 0.88
SMPD1P17405 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMPD1P17405 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.58■□□□□ 0.88
SMPD1P17405 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD1P17405 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD1P17405 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.57■□□□□ 0.88
SMPD1P17405 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.57■□□□□ 0.88
SMPD1P17405 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD1P17405 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.57■□□□□ 0.88
SMPD1P17405 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD1P17405 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.57■□□□□ 0.88
SMPD1P17405 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.57■□□□□ 0.88
SMPD1P17405 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD1P17405 MIR149-201ENST00000384879 89 ntBASIC20.57■□□□□ 0.88
SMPD1P17405 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.57■□□□□ 0.88
SMPD1P17405 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.57■□□□□ 0.88
SMPD1P17405 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.57■□□□□ 0.88
SMPD1P17405 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.57■□□□□ 0.88
SMPD1P17405 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD1P17405 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SMPD1P17405 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SMPD1P17405 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.57■□□□□ 0.88
SMPD1P17405 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD1P17405 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD1P17405 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD1P17405 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMPD1P17405 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD1P17405 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMPD1P17405 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.56■□□□□ 0.88
SMPD1P17405 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.56■□□□□ 0.88
SMPD1P17405 MIR5100-201ENST00000579544 119 ntBASIC20.56■□□□□ 0.88
SMPD1P17405 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SMPD1P17405 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.56■□□□□ 0.88
SMPD1P17405 AC083906.6-201ENST00000641366 219 ntBASIC20.56■□□□□ 0.88
SMPD1P17405 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMPD1P17405 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SMPD1P17405 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.55■□□□□ 0.88
SMPD1P17405 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.55■□□□□ 0.88
SMPD1P17405 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SMPD1P17405 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.55■□□□□ 0.88
SMPD1P17405 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.55■□□□□ 0.88
SMPD1P17405 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.55■□□□□ 0.88
SMPD1P17405 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMPD1P17405 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD1P17405 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD1P17405 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SMPD1P17405 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SMPD1P17405 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SMPD1P17405 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD1P17405 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms