Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga6Q91XY2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Mir6956-201ENSMUST00000183598 62 ntBASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga6Q91XY2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Pcdhga6Q91XY2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga6Q91XY2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Gm27321-201ENSMUST00000185021 205 ntBASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga6Q91XY2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Gm11764-201ENSMUST00000120221 623 ntBASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Pcdhga6Q91XY2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms