Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
SNED1Q8TER0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.53■■□□□ 1.2
SNED1Q8TER0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.53■■□□□ 1.2
SNED1Q8TER0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SNED1Q8TER0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SNED1Q8TER0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC22.53■■□□□ 1.2
SNED1Q8TER0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SNED1Q8TER0 AP001269.4-201ENST00000609611 512 ntBASIC22.53■■□□□ 1.2
SNED1Q8TER0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.53■■□□□ 1.2
SNED1Q8TER0 AL158211.5-201ENST00000623583 2518 ntBASIC22.53■■□□□ 1.2
SNED1Q8TER0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNED1Q8TER0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SNED1Q8TER0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNED1Q8TER0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNED1Q8TER0 MTMR9LP-203ENST00000426597 1545 ntBASIC22.52■■□□□ 1.2
SNED1Q8TER0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC22.52■■□□□ 1.2
SNED1Q8TER0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
SNED1Q8TER0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNED1Q8TER0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.52■■□□□ 1.2
SNED1Q8TER0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SNED1Q8TER0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SNED1Q8TER0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC22.52■■□□□ 1.2
SNED1Q8TER0 IGHV3-22-201ENST00000520721 359 ntBASIC22.52■■□□□ 1.2
SNED1Q8TER0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.52■■□□□ 1.2
SNED1Q8TER0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SNED1Q8TER0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.52■■□□□ 1.2
SNED1Q8TER0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SNED1Q8TER0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SNED1Q8TER0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SNED1Q8TER0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SNED1Q8TER0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.52■■□□□ 1.2
SNED1Q8TER0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.52■■□□□ 1.2
SNED1Q8TER0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SNED1Q8TER0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SNED1Q8TER0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.51■■□□□ 1.19
SNED1Q8TER0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.51■■□□□ 1.19
SNED1Q8TER0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SNED1Q8TER0 DDT-203ENST00000403754 569 ntTSL 3 BASIC22.51■■□□□ 1.19
SNED1Q8TER0 DDT-206ENST00000430101 573 ntTSL 2 BASIC22.51■■□□□ 1.19
SNED1Q8TER0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC22.51■■□□□ 1.19
SNED1Q8TER0 AC113404.2-201ENST00000507884 177 ntBASIC22.51■■□□□ 1.19
SNED1Q8TER0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SNED1Q8TER0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.51■■□□□ 1.19
SNED1Q8TER0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.51■■□□□ 1.19
SNED1Q8TER0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.51■■□□□ 1.19
SNED1Q8TER0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SNED1Q8TER0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SNED1Q8TER0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SNED1Q8TER0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SNED1Q8TER0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.51■■□□□ 1.19
SNED1Q8TER0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.51■■□□□ 1.19
SNED1Q8TER0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.51■■□□□ 1.19
SNED1Q8TER0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SNED1Q8TER0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SNED1Q8TER0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SNED1Q8TER0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC22.5■■□□□ 1.19
SNED1Q8TER0 AC132008.2-207ENST00000454517 770 ntBASIC22.5■■□□□ 1.19
SNED1Q8TER0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SNED1Q8TER0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.5■■□□□ 1.19
SNED1Q8TER0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.5■■□□□ 1.19
SNED1Q8TER0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.5■■□□□ 1.19
SNED1Q8TER0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.5■■□□□ 1.19
SNED1Q8TER0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SNED1Q8TER0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
SNED1Q8TER0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.5■■□□□ 1.19
SNED1Q8TER0 PMS2P7-201ENST00000506558 1336 ntBASIC22.5■■□□□ 1.19
SNED1Q8TER0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SNED1Q8TER0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.5■■□□□ 1.19
SNED1Q8TER0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SNED1Q8TER0 AFG3L1P-217ENST00000557444 2447 ntBASIC22.5■■□□□ 1.19
SNED1Q8TER0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SNED1Q8TER0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.5■■□□□ 1.19
SNED1Q8TER0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.49■■□□□ 1.19
SNED1Q8TER0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.49■■□□□ 1.19
SNED1Q8TER0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.49■■□□□ 1.19
SNED1Q8TER0 RCN1P2-201ENST00000398357 915 ntBASIC22.49■■□□□ 1.19
SNED1Q8TER0 RBM17P3-201ENST00000417687 1192 ntBASIC22.49■■□□□ 1.19
SNED1Q8TER0 SCARNA2-201ENST00000458748 420 ntBASIC22.49■■□□□ 1.19
SNED1Q8TER0 RPL13AP23-201ENST00000480739 586 ntBASIC22.49■■□□□ 1.19
SNED1Q8TER0 AC073648.2-201ENST00000510116 352 ntBASIC22.49■■□□□ 1.19
SNED1Q8TER0 FP475955.4-201ENST00000623131 1990 ntBASIC22.49■■□□□ 1.19
SNED1Q8TER0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
SNED1Q8TER0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
SNED1Q8TER0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.49■■□□□ 1.19
SNED1Q8TER0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNED1Q8TER0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms