Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC9.89□□□□□ -0.83
Cystm1Q8K353 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cystm1Q8K353 AC153881.2-201ENSMUST00000214877 204 ntBASIC9.89□□□□□ -0.83
Cystm1Q8K353 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Gm9987-201ENSMUST00000069768 567 ntBASIC9.89□□□□□ -0.83
Cystm1Q8K353 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 AC108858.1-201ENSMUST00000228461 1498 ntBASIC9.89□□□□□ -0.83
Cystm1Q8K353 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Gm38197-201ENSMUST00000192320 2122 ntBASIC9.89□□□□□ -0.83
Cystm1Q8K353 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Gm8668-201ENSMUST00000120559 1447 ntBASIC9.89□□□□□ -0.83
Cystm1Q8K353 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cystm1Q8K353 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Cystm1Q8K353 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Zkscan3-208ENSMUST00000224820 5398 ntBASIC9.88□□□□□ -0.83
Cystm1Q8K353 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Ap5m1-205ENSMUST00000227431 3757 ntBASIC9.88□□□□□ -0.83
Cystm1Q8K353 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cystm1Q8K353 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Gm13559-201ENSMUST00000120476 863 ntBASIC9.87□□□□□ -0.83
Cystm1Q8K353 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Gm10231-201ENSMUST00000181584 441 ntBASIC9.87□□□□□ -0.83
Cystm1Q8K353 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Gm10175-202ENSMUST00000208752 441 ntBASIC9.87□□□□□ -0.83
Cystm1Q8K353 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms