Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ccne1Q61457 Gm9385-201ENSMUST00000117563 472 ntBASIC20.3■□□□□ 0.84
Ccne1Q61457 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccne1Q61457 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ccne1Q61457 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC20.29■□□□□ 0.84
Ccne1Q61457 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ccne1Q61457 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccne1Q61457 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.29■□□□□ 0.84
Ccne1Q61457 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.29■□□□□ 0.84
Ccne1Q61457 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC20.29■□□□□ 0.84
Ccne1Q61457 Gm7063-201ENSMUST00000186840 981 ntBASIC20.29■□□□□ 0.84
Ccne1Q61457 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.29■□□□□ 0.84
Ccne1Q61457 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ccne1Q61457 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.29■□□□□ 0.84
Ccne1Q61457 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ccne1Q61457 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.29■□□□□ 0.84
Ccne1Q61457 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccne1Q61457 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccne1Q61457 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccne1Q61457 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccne1Q61457 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccne1Q61457 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccne1Q61457 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccne1Q61457 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.28■□□□□ 0.84
Ccne1Q61457 Gm44872-201ENSMUST00000207864 420 ntBASIC20.28■□□□□ 0.84
Ccne1Q61457 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC20.28■□□□□ 0.84
Ccne1Q61457 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.28■□□□□ 0.84
Ccne1Q61457 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.28■□□□□ 0.84
Ccne1Q61457 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccne1Q61457 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.28■□□□□ 0.84
Ccne1Q61457 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccne1Q61457 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccne1Q61457 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccne1Q61457 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccne1Q61457 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccne1Q61457 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccne1Q61457 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccne1Q61457 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccne1Q61457 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccne1Q61457 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.27■□□□□ 0.84
Ccne1Q61457 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccne1Q61457 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccne1Q61457 Gm12008-201ENSMUST00000117791 755 ntBASIC20.27■□□□□ 0.84
Ccne1Q61457 Gm16198-201ENSMUST00000118766 670 ntBASIC20.27■□□□□ 0.84
Ccne1Q61457 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC20.27■□□□□ 0.84
Ccne1Q61457 Rpph1-201ENSMUST00000175096 319 ntBASIC20.27■□□□□ 0.84
Ccne1Q61457 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccne1Q61457 Gm5312-201ENSMUST00000203728 547 ntBASIC20.27■□□□□ 0.84
Ccne1Q61457 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccne1Q61457 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Ccne1Q61457 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccne1Q61457 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccne1Q61457 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccne1Q61457 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Ccne1Q61457 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccne1Q61457 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccne1Q61457 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccne1Q61457 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccne1Q61457 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccne1Q61457 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccne1Q61457 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccne1Q61457 Gm5628-201ENSMUST00000222318 1049 ntBASIC20.26■□□□□ 0.83
Ccne1Q61457 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccne1Q61457 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccne1Q61457 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccne1Q61457 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccne1Q61457 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccne1Q61457 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccne1Q61457 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccne1Q61457 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccne1Q61457 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccne1Q61457 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccne1Q61457 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccne1Q61457 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ccne1Q61457 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC20.25■□□□□ 0.83
Ccne1Q61457 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.25■□□□□ 0.83
Ccne1Q61457 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms