Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 AC073648.2-201ENST00000510116 352 ntBASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
LYSMD4Q5XG99 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 POLD2P1-201ENST00000511220 997 ntBASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 AC106730.1-201ENST00000566722 1090 ntBASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LYSMD4Q5XG99 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LYSMD4Q5XG99 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LYSMD4Q5XG99 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LYSMD4Q5XG99 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
LYSMD4Q5XG99 AC141586.3-201ENST00000562166 1838 ntBASIC18.14■□□□□ 0.5
LYSMD4Q5XG99 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 AC243591.1-201ENST00000452967 1364 ntBASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD4Q5XG99 LINC01521-201ENST00000504184 1943 ntBASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 AL157384.1-201ENST00000445995 2473 ntBASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 AC018712.1-201ENST00000455767 687 ntBASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 AC008687.5-201ENST00000593746 558 ntBASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 TERC-201ENST00000602385 541 ntBASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 AL357033.4-201ENST00000617703 1807 ntBASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 PMS2P7-201ENST00000506558 1336 ntBASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 AL163051.1-201ENST00000569214 1512 ntBASIC18.13■□□□□ 0.49
LYSMD4Q5XG99 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms