Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.27■□□□□ 0.36
RFX4Q33E94 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
RFX4Q33E94 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.27■□□□□ 0.36
RFX4Q33E94 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.27■□□□□ 0.36
RFX4Q33E94 AC098934.4-201ENST00000564127 592 ntBASIC17.27■□□□□ 0.36
RFX4Q33E94 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.27■□□□□ 0.36
RFX4Q33E94 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.27■□□□□ 0.36
RFX4Q33E94 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.27■□□□□ 0.36
RFX4Q33E94 AC133041.1-202ENST00000642053 222 ntBASIC17.27■□□□□ 0.36
RFX4Q33E94 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX4Q33E94 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFX4Q33E94 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.27■□□□□ 0.35
RFX4Q33E94 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX4Q33E94 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.27■□□□□ 0.35
RFX4Q33E94 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.27■□□□□ 0.35
RFX4Q33E94 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.27■□□□□ 0.35
RFX4Q33E94 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.27■□□□□ 0.35
RFX4Q33E94 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX4Q33E94 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX4Q33E94 AC093677.2-201ENST00000600169 1863 ntBASIC17.27■□□□□ 0.35
RFX4Q33E94 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RFX4Q33E94 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX4Q33E94 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX4Q33E94 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX4Q33E94 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX4Q33E94 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX4Q33E94 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RFX4Q33E94 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX4Q33E94 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
RFX4Q33E94 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX4Q33E94 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX4Q33E94 AC012317.2-201ENST00000623305 2251 ntBASIC17.26■□□□□ 0.35
RFX4Q33E94 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX4Q33E94 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX4Q33E94 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX4Q33E94 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX4Q33E94 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.26■□□□□ 0.35
RFX4Q33E94 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RFX4Q33E94 AC112777.1-201ENST00000540175 1423 ntBASIC17.26■□□□□ 0.35
RFX4Q33E94 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX4Q33E94 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RFX4Q33E94 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX4Q33E94 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RFX4Q33E94 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX4Q33E94 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RFX4Q33E94 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX4Q33E94 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFX4Q33E94 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX4Q33E94 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RFX4Q33E94 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RFX4Q33E94 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.25■□□□□ 0.35
RFX4Q33E94 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.25■□□□□ 0.35
RFX4Q33E94 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 UNC93B4-201ENST00000505679 747 ntBASIC17.25■□□□□ 0.35
RFX4Q33E94 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 AL109923.1-201ENST00000618799 583 ntBASIC17.25■□□□□ 0.35
RFX4Q33E94 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.25■□□□□ 0.35
RFX4Q33E94 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RFX4Q33E94 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
RFX4Q33E94 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX4Q33E94 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RFX4Q33E94 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RFX4Q33E94 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RFX4Q33E94 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
RFX4Q33E94 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RFX4Q33E94 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RFX4Q33E94 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 AC069152.1-201ENST00000438030 544 ntBASIC17.24■□□□□ 0.35
RFX4Q33E94 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX4Q33E94 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX4Q33E94 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RFX4Q33E94 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX4Q33E94 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX4Q33E94 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX4Q33E94 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms