Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.61■□□□□ 0.41
RAE1P78406 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.6■□□□□ 0.41
RAE1P78406 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.6■□□□□ 0.41
RAE1P78406 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.6■□□□□ 0.41
RAE1P78406 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RAE1P78406 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.6■□□□□ 0.41
RAE1P78406 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.6■□□□□ 0.41
RAE1P78406 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.6■□□□□ 0.41
RAE1P78406 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.6■□□□□ 0.41
RAE1P78406 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RAE1P78406 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.6■□□□□ 0.41
RAE1P78406 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 CYP2D8P-201ENST00000433633 1490 ntBASIC17.6■□□□□ 0.41
RAE1P78406 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
RAE1P78406 NOC2LP2-201ENST00000407594 1944 ntBASIC17.6■□□□□ 0.41
RAE1P78406 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
RAE1P78406 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RAE1P78406 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAE1P78406 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.59■□□□□ 0.41
RAE1P78406 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RAE1P78406 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAE1P78406 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.59■□□□□ 0.41
RAE1P78406 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.59■□□□□ 0.41
RAE1P78406 CCR12P-201ENST00000446203 998 ntBASIC17.59■□□□□ 0.41
RAE1P78406 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.59■□□□□ 0.41
RAE1P78406 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.59■□□□□ 0.41
RAE1P78406 WWOX-216ENST00000569818 525 ntBASIC17.59■□□□□ 0.41
RAE1P78406 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.59■□□□□ 0.41
RAE1P78406 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.59■□□□□ 0.41
RAE1P78406 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.59■□□□□ 0.41
RAE1P78406 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAE1P78406 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.59■□□□□ 0.41
RAE1P78406 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.59■□□□□ 0.41
RAE1P78406 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.59■□□□□ 0.41
RAE1P78406 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.59■□□□□ 0.41
RAE1P78406 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAE1P78406 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
RAE1P78406 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.59■□□□□ 0.41
RAE1P78406 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAE1P78406 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.58■□□□□ 0.41
RAE1P78406 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.58■□□□□ 0.41
RAE1P78406 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAE1P78406 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAE1P78406 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.41
RAE1P78406 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
RAE1P78406 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAE1P78406 HOXB1-202ENST00000577092 1414 ntBASIC17.58■□□□□ 0.41
RAE1P78406 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAE1P78406 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.58■□□□□ 0.4
RAE1P78406 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAE1P78406 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.58■□□□□ 0.4
RAE1P78406 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RAE1P78406 TSPY14P-201ENST00000303979 915 ntBASIC17.58■□□□□ 0.4
RAE1P78406 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAE1P78406 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RAE1P78406 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.58■□□□□ 0.4
RAE1P78406 BX088651.1-201ENST00000540551 451 ntBASIC17.58■□□□□ 0.4
RAE1P78406 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.58■□□□□ 0.4
RAE1P78406 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.58■□□□□ 0.4
RAE1P78406 AC116562.4-202ENST00000641738 218 ntBASIC17.58■□□□□ 0.4
RAE1P78406 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RAE1P78406 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAE1P78406 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RAE1P78406 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAE1P78406 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAE1P78406 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.58■□□□□ 0.4
RAE1P78406 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAE1P78406 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAE1P78406 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.58■□□□□ 0.4
RAE1P78406 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.58■□□□□ 0.4
RAE1P78406 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAE1P78406 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms